Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01026 ATGACGGCTGAGGAATTGACTTCGATCGAGTATGTGATGGAGGCAGCATCCGGACCCCACTTCTCGGGCCTCCGCCTTGACGGTCGCCTATCCGCTCCATCAACTCCTTCTTCATCTTCTGCCAATCGCGCCTTCGCTGTTTCCTTTGCTCCCTCGGATTTATCGTCAGACTTCAATGCTGACCCTTCTGTTCCCCGGCAACCCTTTGTCATAGGCGTTTCCGGAGGTACGGCCTCAGGGAAGACAACAGTCTGTGATATGATTATTCAACAGCTTCACGATCACCGTGTTGTTCTCGTTAATCAGGATTCATTTTATCGTGGTCTGACGCCTGAAGAAGTAGAGCGTGCGCACGAATACAATTTTGATCATCCGGATGCTTTCGATACTGAACAGCTCCTGGAGTGCGTGCTGAAACTCAAAAATGGGCAGTCTGTTCAGGTTCCAATATATGACTTCAAGAAGCACCAACGTTCTTCAGACAGTTTTCGGCAGGTTAATGCTTCTGACGTCATAATCTTGGAGGGAATTCTAGTTTTCCATGACCCACGTGTTCGTGACCTGATGAACATGAAGGTTTTCGTGGACACAGATGCTGATGTGAGGCTTGCCCGGCGAATAAGACGTGACACAGTGGAAAGGGGTAGAGACATAAATTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAACCTGCTTTTGATGATTTTGTTCTCCCATCAAAGAAGTATGCTGATGTAATTATTCCCCGAGGAGGTGATAATCACGTGGCCGTTGACTTGATTGTGCAGCACATTCATACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCCAATGTTTATGTAATTCAGTCAACATTTCAGATACGAGGGATGCATACTTTGATTCGTGACCGAGACATATCAAAACATGATTTTGTATTTTATTCTGATAGACTTATCCGTCTGGTAGTTGAGCATGGCCTTGGCCATTTGCCATTCACTGAAAAGCAAGTAATTACTCCTACAGGATCAGTATATACTGGTGTTGATTTCTGCAAGAAGTTGTGTGGTGTCTCAATTGTTAGAAGTGGTGAAAGTATGGAAAACGCATTGCGTGCATGCTGCAAAGGTATAAAAATCGGAAAGATTCTGATCCACAGAGATGGAGATAACGGGAAACAGCTTATATATGAAAAGCTACCTAACGATATATCAGAACGTCATGTCCTGCTTCTGGACCCAGTCCTTGCAACAGGCAATTCTGCAAATCAAGCAATTGAACTACTCATTCGCAAAGGAGTACCTGAGTCCCACATCATATTCCTAAATCTCATCTCTGCCCCTGAGGGAATCCATTGCGTGTGCAAAAGGCACCCATCATTAAAAATTGTAACATCAGAAATTGATACTGCATTAAATGAGGAGTTTCGAGTCATACCAGGAATGGGTGAGTTTGGTGATCGATACTTCGGTACAGATGATTGA 1470 0.4401 MTAEELTSIEYVMEAASGPHFSGLRLDGRLSAPSTPSSSSANRAFAVSFAPSDLSSDFNADPSVPRQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEEVERAHEYNFDHPDAFDTEQLLECVLKLKNGQSVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDPRVRDLMNMKVFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAVDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIELLIRKGVPESHIIFLNLISAPEGIHCVCKRHPSLKIVTSEIDTALNEEFRVIPGMGEFGDRYFGTDD* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01026 489 SUPERFAMILY PRTase-like 271 488 IPR029057 -
Pte13g01026 489 Pfam Phosphoribulokinase / Uridine kinase family 70 256 IPR006083 GO:0005524|GO:0016301
Pte13g01026 489 NCBIfam uridine kinase 69 268 IPR000764 -
Pte13g01026 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 261 IPR027417 -
Pte13g01026 489 Gene3D - 65 271 IPR027417 -
Pte13g01026 489 FunFam Uridine kinase 272 487 - -
Pte13g01026 489 CDD UMPK 70 268 IPR000764 -
Pte13g01026 489 FunFam Uridine kinase 65 271 - -
Pte13g01026 489 Pfam Uracil phosphoribosyltransferase 286 487 - -
Pte13g01026 489 Gene3D - 272 487 IPR029057 -
Pte13g01026 489 PANTHER URIDINE KINASE 60 397 - -
Pte13g01026 489 CDD PRTases_typeI 345 460 IPR000836 -
Pte13g01026 489 PRINTS Uridine kinase signature 214 225 - -
Pte13g01026 489 PRINTS Uridine kinase signature 68 85 - -
Pte13g01026 489 PRINTS Uridine kinase signature 143 158 - -
Pte13g01026 489 PRINTS Uridine kinase signature 98 109 - -
Pte13g01026 489 PRINTS Uridine kinase signature 200 210 - -
Pte13g01026 489 PRINTS Uridine kinase signature 236 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01026 Pte-Chr13 10382566 10388093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01026 4 489 PRT Gene Family AT5G40870 85.597 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01026 K00876 - qsa:O6P43_008817 863.218