Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01018 ATGAAGTCAAGAGGTCCTCCTTCATGTCCCGTCGATCCAAAGAGCGGTTTCAACCGTATCACTAGGGCTTACCACAGTCTTAGACCTCCCATTGAGCTTCCTCCACTCCGGACTCATCTCACGGCAGCAGCTTACGCACTTTACCACAATCGCAACTCACCATGGTCACCGCACTCTGTTGCATTCATCAATGGCTTCACGGGTCAGCGAGTTTCACACTCGGAGTTTATCCGTCAAACACAAACTCTCATCACCCATCTCAAATCTGTCGTCGGACTTTCCAAAGGTGACACGGCTTTCATTCTCTCTCCAAATCTCATTCAGGTTCCGGTGATCTACTTGGCCTTACTCTCACTCGGTGTGATCGTCTCCCCTGGAAATCCTATCAGCACTGAAACTGAGATTTCTCACCTAATCGAGCTGTGTGAACCGGTGATTGCCTTTGCTACGACTTCAACGGTTCACAAGTTGAGTAAATTTAAATTTCAGTCGAGGACCATACTCATTGACTCGGTCGAGTTCGAGTCACTCATACGAACAACGAGAGATAATGTGTCAGTTGTACCGGTGAAATTAAAGAAAGCAAACGACAAAGTTGAAGTGAGTCAGTCTGACACAGCAGCGATATTGTACTCGTCGGGAACCATGGGGAAGTTGAAAGGAGTCATGCTCACTCACCGGAATTTGATAGCCGCAATGGCCGTTTCTTTAGGAATTCGTGAAGCAAGAAAGAATCCATCGATTTTGCTTATCACGGTGCCGTTGTTTCACGTGTATGGCTTCGTGCGTTGTTTGAATTCTTTGGCAATGAACGAGACAGTGGTGATTATGGAAAGGTTTGAGATGAAAAAGACGTTGAAGGCGGTGCAACAGTTCAAGGTGACGCAGATGGCAGTGGCGCCACCGTTGATTGTGGCGTTGGCTAAAGATAACGTGACGGACGGGTTTGACTTGAGCTCTCTAGAAAGTGTTGGATGCGGCGGAGCTCCACTGGGGAAGGATATGGCAGCATCTTTCTGTTTCAAATTCCCTAGAGTTGTGTTGAAGCTGGCATATGGGTTGACTGAAACAACAGCAGGCCTTTCTAGAATAGCAGGGCCTGGAGAAGGCAGCCGTATGGGAGCAGCTGGGAAGCTTGATCCAGGCCTTGAGGCAAAAATCATAGATACCGAAACTGGTGAAGCTTTGCCTCCCGGCACGGATGGTGAACTTTGGGTGAGAGGACCTTCAATAATGAAAGGTTATCTTGGAGATGAAGAATCAACTGCTGTCACATTGGTAAAAGATGGATGGTTGAGAACTGGCGACCTATGCTATTTTGATGACGAAGGTTTTCTTTACATTAAAGATAGGCTAAAGGAGATGATCAAATACAAGGGATATCAGGTTGCCCCTGCAGAGCTAGAGGACTTGCTCAAACCTCACCCGGATATACTTGACGCTGCAGTTATCCCGTAA 1458 0.4733 MKSRGPPSCPVDPKSGFNRITRAYHSLRPPIELPPLRTHLTAAAYALYHNRNSPWSPHSVAFINGFTGQRVSHSEFIRQTQTLITHLKSVVGLSKGDTAFILSPNLIQVPVIYLALLSLGVIVSPGNPISTETEISHLIELCEPVIAFATTSTVHKLSKFKFQSRTILIDSVEFESLIRTTRDNVSVVPVKLKKANDKVEVSQSDTAAILYSSGTMGKLKGVMLTHRNLIAAMAVSLGIREARKNPSILLITVPLFHVYGFVRCLNSLAMNETVVIMERFEMKKTLKAVQQFKVTQMAVAPPLIVALAKDNVTDGFDLSSLESVGCGGAPLGKDMAASFCFKFPRVVLKLAYGLTETTAGLSRIAGPGEGSRMGAAGKLDPGLEAKIIDTETGEALPPGTDGELWVRGPSIMKGYLGDEESTAVTLVKDGWLRTGDLCYFDDEGFLYIKDRLKEMIKYKGYQVAPAELEDLLKPHPDILDAAVIP* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01018 485 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 485 - -
Pte13g01018 485 Gene3D - 32 453 IPR042099 -
Pte13g01018 485 Gene3D - 454 485 IPR045851 -
Pte13g01018 485 Pfam AMP-binding enzyme 57 458 IPR000873 -
Pte13g01018 485 SUPERFAMILY Acetyl-CoA synthetase-like 55 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01018 Pte-Chr13 10307302 10310309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01018 11 485 Monolignol Biosynthesis Gene Families AT5G63380 48.871 1.23e-160 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01018 K01904 - qsu:111992511 575.474