Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01015 ATGGCTGGAGAATCCGTTGTTTGTATCATCAATTACCCCCAAGAAAGATGGTGCTTCATCTATTGCCTCAAGTTCATTAAGGGCTCTTACCCTTCTGGTGGTATTTCAGGATTTTTAAGTTTCGCTACCGTTGCAACTTCATCCGATGAAGCTGAACATGGTTTGGCAGCCCCAAATTATCCTTGGCCTCATGAGGGCATTCTGAGTTCATATGATCATGCTTCGATCCGTCGTGGCCATCAGGTTTACCAGCAAGTATGTGCCTCCTGCCATTCTATGTCTCTGATATCCTACCGCGATTTGGTGGGCGTTGCATATACTGAAGAGGAGACCAAGGCGATGGCAGCTGAGATTGAGGTAGTTGATGGTCCTAACGATGAGGGCGAGATGTTTACACGCCCTGGTAAACTCAGTGACCGCTTTCCTCAGCCATATGCAAATGAACAAGCAGCTAGGTTTGCTAATGGAGGGGCTTATCCTCCAGATTTAAGTCTTATTACTAAAATCCGCGAGGGACTGCATTACAACCCTTATTTTCCTGGGGGAGCCATTGCCATGCCTAAGATGCTTAACGGTGGTGCTGTTGAGTATGAAGATGGTACCCCTGCTACTGAAGCTCAGATGGGGAAGGATGTTGTGACATTCTTGTCTTGGGCTGCAGAACCGGAGATGGAAGAGAGGAAACTGATGGGATTTAAATGGATTTTCGTACTGTCACTGGCTTTACTTCAAGCTGCATATTACCGTCGCTTGAAGTGGTCGGTTTTGAAGTCTCGCAAGCTAGTTCTTGATGTCGTCAACTAG 804 0.4677 MAGESVVCIINYPQERWCFIYCLKFIKGSYPSGGISGFLSFATVATSSDEAEHGLAAPNYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKIREGLHYNPYFPGGAIAMPKMLNGGAVEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01015 267 Pfam Cytochrome C1 family 62 172 IPR002326 GO:0009055|GO:0020037
Pte13g01015 267 ProSiteProfiles Cytochrome c family profile. 74 220 IPR009056 GO:0009055|GO:0020037
Pte13g01015 267 Gene3D - 51 171 IPR036909 GO:0009055|GO:0020037
Pte13g01015 267 Gene3D - 172 222 IPR036909 GO:0009055|GO:0020037
Pte13g01015 267 Gene3D - 223 266 - -
Pte13g01015 267 SUPERFAMILY Cytochrome c 55 221 IPR036909 GO:0009055|GO:0020037
Pte13g01015 267 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 222 266 IPR021157 -
Pte13g01015 267 FunFam Cytochrome c1, heme protein, mitochondrial 223 267 - -
Pte13g01015 267 PRINTS Cytochrome C1 signature 203 222 IPR002326 GO:0009055|GO:0020037
Pte13g01015 267 PRINTS Cytochrome C1 signature 183 202 IPR002326 GO:0009055|GO:0020037
Pte13g01015 267 PRINTS Cytochrome C1 signature 222 237 IPR002326 GO:0009055|GO:0020037
Pte13g01015 267 PRINTS Cytochrome C1 signature 80 99 IPR002326 GO:0009055|GO:0020037
Pte13g01015 267 PRINTS Cytochrome C1 signature 60 79 IPR002326 GO:0009055|GO:0020037
Pte13g01015 267 PANTHER CYTOCHROME C1 33 170 IPR002326 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01015 Pte-Chr13 10282915 10288729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01015 34 268 Chloroplast and Mitochondria Gene Families AT5G40810 84.170 2.21e-141 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01015 K00413 - csv:101215010 439.499