Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00995 ATGTGCCACAAGAAAAGTCCTTCCAATGTACACAACAAAAACAACAACGTTGTTTCTTCCAATACTGTCCATCTTAAAAGATCCAAGTCCACAGTTTCTCTCAAACCTCCACATCGGAAAACCAGAACCAAACTCAGAAAACTCAAGTATCTCAGTCTTAGACTTCAACTCTCTTCTGAGACCTCACAATCCAAAAACGTTAAATCCAGGTCTGATCGGACTGCTGTAGACAACGCAATGGTTATTGATCAACAGCCCAACCTTGTCCCTTTGTATTCAGAAAATGATCGTCATGAACATGATGATGTCGGTCATGACAGAGACGAGCACGACGACGTTGCTTTCCTGTTCAACCACTCCGAGGATAGTGCCGCCACTCTGAATGGCCTGCTTGGATCTGACTCCACCACCCAAACCACGGGAATACCGAACACTGCCTTGTCATCCGAGGAGGATTCATTCTCGCCTCCGGCTTCTGTGCTGTCGTACGCTCGTTTTGATTGTGTGGATAATGCGCAGTCTCTTGTACGGAAAGCAATGAGGAGGAAAGAGAGGGATTCGAGAGGAGAGAGATTGGTGTGTTATTCAGAGGTGGTGGAGAAGCAGGAGCAGACGACGGAGGAGACAAACAGTGCACACTCTGTAGCCTCTGCCAGAGTGAAGAAAGAGGAGGAGGAACCGTACAACTACTCCTATTACGGGTGCAATCATTACGGTAGCTTTGATAACAAGAATCCGACAAAGGGTTGTGGGGAAACAACGACGTTAGGTTCCTTATCACTGAAACTCGATTACCAGGAGATCTTGAATGCATGGTCTGATAAGGGTCCATGGTACCTTGATGGAGAGTCCCCACAAACTGTCCCCGAGTTGCATGATGAGATTCTTTGCATCAGTCCTACTTCCAATTTTGCCATGGATGTTTGGGGAAGTTGTGGTGCTGGCAATGTGTGGAGAGTCCCAGAAAGTGGTGCAGTGGATGGCAAGGAGTGCATATCAGGGTCAGGGAAGGAAGGGCAAAAGATTTGGAAGACAGATGAAAAGAGAGCAGAAAGTGTGTTGAGATATAAGGAGAAGAGGCAGAGCAGACTCTTCTCAAAACGAATACGTTATGAAGTGCGGAAGATAAATGCTGAGAAACGCCCACGGATGAAGGTACAACTATCCTCCATTCTCAACAACATTATTCCCTATTTGATTTTGACATGA 1209 0.4632 MCHKKSPSNVHNKNNNVVSSNTVHLKRSKSTVSLKPPHRKTRTKLRKLKYLSLRLQLSSETSQSKNVKSRSDRTAVDNAMVIDQQPNLVPLYSENDRHEHDDVGHDRDEHDDVAFLFNHSEDSAATLNGLLGSDSTTQTTGIPNTALSSEEDSFSPPASVLSYARFDCVDNAQSLVRKAMRRKERDSRGERLVCYSEVVEKQEQTTEETNSAHSVASARVKKEEEEPYNYSYYGCNHYGSFDNKNPTKGCGETTTLGSLSLKLDYQEILNAWSDKGPWYLDGESPQTVPELHDEILCISPTSNFAMDVWGSCGAGNVWRVPESGAVDGKECISGSGKEGQKIWKTDEKRAESVLRYKEKRQSRLFSKRIRYEVRKINAEKRPRMKVQLSSILNNIIPYLILT* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00995 402 MobiDBLite consensus disorder prediction 1 42 - -
Pte13g00995 402 Pfam CCT motif 349 387 IPR010402 GO:0005515
Pte13g00995 402 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 2 386 - -
Pte13g00995 402 MobiDBLite consensus disorder prediction 7 29 - -
Pte13g00995 402 ProSiteProfiles CCT domain profile. 349 391 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00995 Pte-Chr13 9615918 9618444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00995 258 392 C2C2-CO-like Transcription Factor Family AT1G73870 36.957 4.75e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte13g00995 CCT 4.3e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00995 - - qsu:112007042 215.312