Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00982 ATGACATTGTTTATGCAAGATTTGTCTATGCGGTCTACTGATAATCGGATGGAGTCTATGTCAAAATCTCAGACTTCAGCATCTGCAGAAGATAATTGTCTTCCTTCAACATCTGACACAACTCTTTCTTCCCAGCCTTCCTCAGCTAAATCATATAGAAACCACTCAGCTTCTTCGACCTCTTATTTGAATGGTGACAGTCATGGTGTGAAGGTTGTTCCCCATTCTAATGGATATATCATCAATCAAAATCATACTTACCAGGCAGTCAAAGAGATACAGAACATGGGAAAAGAATACAACAATCTAAATGGTGAATTATATCATGTGAACTCCTGTGACGTGCTTACTCAGAAGGCAGAAATTTGTTGTTCAGGGCAGTTTTCTAATGTGGAAACAAAAATAAGCACCAAGGAACCAATTTTTGATTCGGAAACTTGTGGTTTAGGTTGTCGATCAGATTCTGGAAACACTGTTTCAAATTCAGAAAAAGGAGTGGAGCGTATGAAAAGTTGTCATCAGTCAGAGGTTGCCAGTTGTTCTAGTCCTCAGAATAGTTTTGCTGTTCCCTTGTATGCAGAAGCCAAACAAAGTTTTACTAATACAGAAGTTAGTGAATGCATGAGTATTGTTGATAAGTCAGGGTACAGTGGTGAAGCTTCTAATTCTTGTGATTTCAATGAGAGTCGGAAGACCAGCATTTATAGAGAGAGTACTGGTAGTGATGTCAGTGAAGAAAGCAGCTCCAGTAGCTTCAGTAGTGCATTATACAAACCTCACAAATCAAATGATGTAAGATGGGAAGCAATTCAAGCTGTTCGATGCCAATCTCATGATGGGATACTGGACATGGGACATTTTAAGTTGTTAAGGACACTAGGATATGGAGATATAGGAAAAGTATTTCTAGCAGAACTGAATGGAACTAGAATTTGTTTTGCCATGAAGGTTATGAACAAGGCTGCTCTAGCGAGTAGAAAAAAACTTCCGAGAGCTCAAACAGAAAGAGAGATACTTCAATCTCTGGACCATCCATTTCTTCCAACGCTCTACGCACACTTTGAGACAGATGAATCCACTTGCTTGGTAATGGAGTACTGCCCTGGTGGGGATCTACATGCTCTTAGGCAAAAACAACCTGGGAAGTACTTCCGCGAGCATGCTGCAAGGTCTGTACTCTTGTTCTCCTCTTATTAG 1197 0.401 MTLFMQDLSMRSTDNRMESMSKSQTSASAEDNCLPSTSDTTLSSQPSSAKSYRNHSASSTSYLNGDSHGVKVVPHSNGYIINQNHTYQAVKEIQNMGKEYNNLNGELYHVNSCDVLTQKAEICCSGQFSNVETKISTKEPIFDSETCGLGCRSDSGNTVSNSEKGVERMKSCHQSEVASCSSPQNSFAVPLYAEAKQSFTNTEVSECMSIVDKSGYSGEASNSCDFNESRKTSIYRESTGSDVSEESSSSSFSSALYKPHKSNDVRWEAIQAVRCQSHDGILDMGHFKLLRTLGYGDIGKVFLAELNGTRICFAMKVMNKAALASRKKLPRAQTEREILQSLDHPFLPTLYAHFETDESTCLVMEYCPGGDLHALRQKQPGKYFREHAARSVLLFSSY* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00982 398 Gene3D Phosphorylase Kinase; domain 1 281 394 - -
Pte13g00982 398 SUPERFAMILY Protein kinase-like (PK-like) 270 392 IPR011009 -
Pte13g00982 398 SMART serkin_6 287 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00982 398 Pfam Protein kinase domain 288 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00982 398 MobiDBLite consensus disorder prediction 236 257 - -
Pte13g00982 398 PANTHER FLIPPASE KINASE 1-RELATED 61 390 - -
Pte13g00982 398 MobiDBLite consensus disorder prediction 1 65 - -
Pte13g00982 398 ProSiteProfiles Protein kinase domain profile. 287 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00982 398 FunFam Serine/threonine-protein kinase D6PK-like 285 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00982 Pte-Chr13 9455749 9458009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00982 192 390 AGC Kinase Gene Family AT5G47750 62.312 6.79e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte13g00982 Pkinase 4.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00982 K08286 - qsa:O6P43_004675 396.741