Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00976 ATGGTGGGGGATGGCATCAATGACTCTCTGGTGCTTGTCGCAGCAGATGTGGGAATAGCAATTGGTGCTGGCACTGATATTGCTATCGAGGCAGCGGATATTGTTCTAGTGAAGAGCAACTTGGAGGATGTCATAACTGCCATTGAATTTTCTCGGAAAACGTTTTGGCAGATTGTCTGA 180 0.4667 MVGDGINDSLVLVAADVGIAIGAGTDIAIEAADIVLVKSNLEDVITAIEFSRKTFWQIV* 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00976 59 Gene3D - 1 59 IPR023214 -
Pte13g00976 59 PRINTS H+-transporting ATPase (proton pump) signature 33 58 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte13g00976 59 PRINTS H+-transporting ATPase (proton pump) signature 2 18 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte13g00976 59 SUPERFAMILY HAD-like 1 56 IPR036412 -
Pte13g00976 59 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Pte13g00976 59 PRINTS P-type cation-transporting ATPase superfamily signature 25 37 - -
Pte13g00976 59 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00976 Pte-Chr13 9372945 9373124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00976 1 58 Primary Pumps ATPases AT1G63440 86.207 4.69e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00976 K17686 - sspl:121784968 78.1814