Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00973 ATGGTGAAACCTAAAACATTCCCTTTCGATATCATATCTCACAGTCTCAAATCTTCTCCCTTCCTCTACTTTCGTTCTGATAAACTCATGCATACTTCAGCTTCCAGATTATTCTGTTTCTCGGTACCTCCATTACCTTCTAATTTCAAACGACCTCTCTCTTTGTCTTTACCTTGTAGTACATTCTCGACAACCTCCACTCGTTACCCACTTCAATATGAGATGATCGTCAGCCACCCAGCTCACTTGGAGTATGCCAACCCGAGACAGACACGTATCCGTCCCAGCGGGCTCCACGGGCAGCCTGCTCCAGAGGACTCTCTTGGAAATGAAAATGAAATAGAAGAAGTAGAAGAGGAACGACATGCTGCGGAATCGGGTGGTTTTGAAAGTTGGGTTGATCGGAAACTGGCTTCTGAGAAGGAAAAACACTTGCCCGAAATGGATAAAGCTAAGAGGAAGTATTTTAATAAGAGGAGAAAGAGGATGTACGGGTCTGATTCAGAGGAAGAGAGCCGGAAACCTGAAGAGAACTTTGTGGAGCTCAAGCCCGAGGTTGTGGAGTTTCCTACGTTGCATAAGAGAGAAGAGGAGTTATATTTTTATGATGCCTTTGCTTTTCCTTGGGAGAAAGAGAAGCATTATAAGATGGTGTATCAGTTGGAGAAGAAATATTTTCCTGATCAGTGTCTTGATAAGGCATTTCTTGAACCTGGGGAAATCAATGTTAATGTGAAGAAAGGAAAGGTGAAGACTAAGAAGAAAGAAGAAGAGGTTGGCGATAAATTAGATGATAACAAGTTGGTGTTTTTTGAGGAAAATGGTAAGAGAGATTTTGGGAAGGAAAGTGGAAAGGATGTTACTGAGAGAAAAGTGGAAGAGTTCTTTAAGTGTTTGAAGAAAGACCCAAATAAGGATGTTGCTGTTAATAAGGGAGAGCCGTATCTTGCCACGAGGAGTACCGGTCTTCCTCCCATATGGGATGGTCCATTTGGGACAGTGGTTTTGGTTAACAAGCCAAAAGGCTGGACTTCATTTACGGTTTGTGGAAAGTTGCGTCGCCTAGTCAAAGTGACAAAGGTTGGACATGCTGGAACTCTTGACCCAATGGCAACTGGTTTACTTATTGTCTGCATCGGTAAAGCAACAAAATTGGTAGAAAGATATCAACATATGATCAAAGGTTATAATGGTGTTTTTCGACTTGGAGAGGCTACTTCAACACTGGACGCTGATTCACCAGTGTGTCACTTATCCTGA 1260 0.4254 MVKPKTFPFDIISHSLKSSPFLYFRSDKLMHTSASRLFCFSVPPLPSNFKRPLSLSLPCSTFSTTSTRYPLQYEMIVSHPAHLEYANPRQTRIRPSGLHGQPAPEDSLGNENEIEEVEEERHAAESGGFESWVDRKLASEKEKHLPEMDKAKRKYFNKRRKRMYGSDSEEESRKPEENFVELKPEVVEFPTLHKREEELYFYDAFAFPWEKEKHYKMVYQLEKKYFPDQCLDKAFLEPGEINVNVKKGKVKTKKKEEEVGDKLDDNKLVFFEENGKRDFGKESGKDVTERKVEEFFKCLKKDPNKDVAVNKGEPYLATRSTGLPPIWDGPFGTVVLVNKPKGWTSFTVCGKLRRLVKVTKVGHAGTLDPMATGLLIVCIGKATKLVERYQHMIKGYNGVFRLGEATSTLDADSPVCHLS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00973 419 SUPERFAMILY Pseudouridine synthase 332 417 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pte13g00973 419 Pfam TruB family pseudouridylate synthase (N terminal domain) 353 415 IPR002501 GO:0006396
Pte13g00973 419 Gene3D Pseudouridine synthase 329 419 - -
Pte13g00973 419 PANTHER TRNA-PSEUDOURIDINE SYNTHASE 224 416 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pte13g00973 419 MobiDBLite consensus disorder prediction 92 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00973 Pte-Chr13 9352352 9359374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00973 334 406 NAC Transcription Factor Family AT3G57150 45.205 2.35e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00973 K03177 - zju:107415230 476.092