Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00962 ATGATTTGTCTCCGTTACTCCACGGCACACACCATGCAAGACGATCATCACCACAGCTCTCAGAAGCTTTCGTCTTTCCAAATACCCACAGATGGAGACAACAAAGCCAAAGAATTCCGACCACTTTCCTTGTTGCCACCGCATATGCGAGCCTTCCACCTTGCATGGCTAAACCTCTTCTCTTGCTTCTTTTCTACCTTCTCAATCCCTCCACTAATTCCAGTCATCCGCGACAACCTCAACCTCACTGATACTGATATTGGCAGAGCCGGAATAGCCTCCTTCGTAGGCTCCATCTTCTCTCGTTTCCTGATGGGACCAACATGTGACTTGATAGGACCCCGCATAGCCTCAGGCACACTGTCTCTCCTCACTGCACCTATCATCCTTGCTACCTCTCTAATTTCTTCACCCCAAGGTTTCGTCATCATCCGCTTCCTTGTGGGGTTTTCACTCGCAAACTTCGTGTCCAACCAGTTTTGGATGAGTTCAATGTTTTCTACCAACGTGGTTGGGTTAGCAAATGGGGTTTCAGCTGGTTGGGCTAATGTCGGTTCTGGGGTTACGCAACTGGTCATGCCACTCATTTACAATCTGACCATGAGCTTAAAGGTTCCAGCTTTCACTGCTTGGCGTGTTGCTTATATAGTTCCAGCAACATTCCAAGTCATCACTGGTGTGCTAGTCTTGGCTTTCGGCCAAGACTCACCTTCTGGGAACTACACAGCACATGATCCACGAATACAGCAAAGACAGAAAAATAACAACTTTTTCGAAGTTCTATTTCACGGGTTAACCAATTACAGAGGATGGATTCTGGGTTTGCTGTATGCATATTCATTTGGAGTAGAGTTAACAACTGACAATATCGTAGCACAGTATTTCTACGATAGATTCAGTGTAAATCTTCAAACTGCTGGAATCATCGCAGCAAGCTTTGGAATGGCAAATTTGTTTTCCAGACCAACTGGTGGGGTGCTATCAGACAAGATGGGGAAGAGGTTCGGCATGAGAGGACGGCTGTGGGGTCTTTGGATTGTACAAACCTTATCAGCATTGCTGTGTGTGTTGCTAGGACGAGTTAGCTCGCTCTGGAGCTCTATATTAGTCATGTGCATCTTCTCTTTGTTCGTCCAAGCTGCTTCTGGCCTCACATTTGGAGTGGTCCCCTTTGTCTCAAAGAGGGCACTTGGAGTGATATCAGGAATGACAGGAAGTGGAGGGGCTATAGGGGCAGTGGTGACACAGACGCTATTGTTCTCAGGCTCTAAATTCTCAAAGCAAACTAGCATATCTCTTATGGGAATTATGATGCTTATTTGCACACTTCCAGTCACTTTGATATATTTTCCTCAGTGGGGCGGTATGTTTTGTGGTCCTTCTTCGATAAACTTCAACTCTGTTGAGAACAACTATTGTCTGCTCCAATAA 1431 0.4591 MICLRYSTAHTMQDDHHHSSQKLSSFQIPTDGDNKAKEFRPLSLLPPHMRAFHLAWLNLFSCFFSTFSIPPLIPVIRDNLNLTDTDIGRAGIASFVGSIFSRFLMGPTCDLIGPRIASGTLSLLTAPIILATSLISSPQGFVIIRFLVGFSLANFVSNQFWMSSMFSTNVVGLANGVSAGWANVGSGVTQLVMPLIYNLTMSLKVPAFTAWRVAYIVPATFQVITGVLVLAFGQDSPSGNYTAHDPRIQQRQKNNNFFEVLFHGLTNYRGWILGLLYAYSFGVELTTDNIVAQYFYDRFSVNLQTAGIIAASFGMANLFSRPTGGVLSDKMGKRFGMRGRLWGLWIVQTLSALLCVLLGRVSSLWSSILVMCIFSLFVQAASGLTFGVVPFVSKRALGVISGMTGSGGAIGAVVTQTLLFSGSKFSKQTSISLMGIMMLICTLPVTLIYFPQWGGMFCGPSSINFNSVENNYCLLQ* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00962 476 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 14 472 IPR044772 GO:0015112
Pte13g00962 476 SUPERFAMILY MFS general substrate transporter 29 449 IPR036259 -
Pte13g00962 476 Gene3D MFS general substrate transporter like domains 256 454 IPR036259 -
Pte13g00962 476 Gene3D MFS general substrate transporter like domains 48 241 IPR036259 -
Pte13g00962 476 FunFam Nitrate transporter 2.1 254 455 - -
Pte13g00962 476 CDD MFS_NRT2_like 52 447 IPR044772 GO:0015112
Pte13g00962 476 ProSiteProfiles Major facilitator superfamily (MFS) profile. 51 447 IPR020846 GO:0022857
Pte13g00962 476 FunFam High affinity nitrate transporter 2.5 44 240 - -
Pte13g00962 476 Pfam Major Facilitator Superfamily 56 412 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00962 Pte-Chr13 9164186 9167416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00962 12 460 Inorganic Solute Cotransporters AT5G14570 63.124 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00962 K02575 - qsa:O6P43_008930 734.176