Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00950 ATGGCTCATTCATTGGGGAAAATTTTTCCTGTCAGTGCAAATGACTATGAGTTATATGAAGAAGTTGGAGAAGGTGTTAGTGCTACTGTGTATAGAGCTCTTTGCATTCCACTCAATGAGATAGTTGCTATCAAGGTTCTTGATTTGGAGAAGTGCAACAATGACCTGGATGGTATCCGAAGGGAGGTACAAACCATGATTTTGATTGAACATCCAAATTTATTGCGAGCACATTGCTCTTTCACCACTGGACACCATCTTTGGGTCGTGATGCCATATATGGCTGGGGGTTCCTGCCTTGGCATAATGAAATCCAACTATACTGAAGGTTTTGAGGAGCCGGTTATTGCTTCTTTGTTGCGTGAGGTTCTGAAAGCTCTTGTCTATCTTCATGCGCATGGTCATATTCATAGAGATGTGAAGGCTGGAAACATTTTAATTGATAGTGACGGAGCAGTCAAGTTAGCTGATTTTGGAGTGTCAACTTGTATGTTTGATGCTGGAGACCGGCAACGTTCAAGAAATACATTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAGCAACTGCATGGATACGATTTCAAAGCAGACATATGGTCATTTGGCATAACAGCACTTGAACTTGCTCATGGTCATGCGCCATTTTCCAAGTATCCACCAATGAAAGTTTTACTCATGACATTACAAAATGCCCCTCCCGGTCTTGACTATGAAAGAGATAAGAGATTTTCAAAGTCATTCAAGGAGATGGTAGCTACATGCTTAGTCAAGGATCCAAAGAAGCGGCCAACTTCAGAAAAGCTTTTAAAACACCACTTTTTCAAACATGCACGGTCTACAGATTACCTATCTAACACCATCCTAGATGGCCTTCCGCCTTTGGGAGATCATTTTAGAATGCTGAAGGCAAGAGAGGCAGATCTCTTGATGCAAAACAAGGCACTCTATGAGAACAAAGACCAATTATCACAGCAAGTGTATATTCGAGGAATTAGTGCCTGGAATTTCAATCTTGAAGATTTGAAAAGTCAAGCAGCCCTTATCCAAGATGACAATATGCTTAATGTAGAAGAGACAGAAACAAGTAAGCAGAAGGACGTCGATAATAGGACTCCAGAAAATGGGCCATCAGATAAGGCACTTGACCGTTCGAGTGCTACACCTACCAAGGGGAAGGAGGATGGCTTAAATGATCTTCAGGATTTGGAGAATTCACTTGCTTCATTTCCTATTAAACCCCTTCAAGCTCTTAAAGACTGCTTCGATGTTGGTGGTGAGGATGGTGATGAAACTAGTCCAAGAGAACTAGATAAAGAAGATGAAAATGAGGTGGTTGAAAGTTCAGGACAAAGTAGTTTCATACCAAATGATGTTGAAATTGAGCATAAAAAGTTTTCAAGTGGTTCTCTACTGCCAGATAATTTTTTCTCTCACAAAAAAGCTATGGCTGATTCAGACAGGGATCATCCACATTCACTATACCATGGAAGGACCCATAGCGGTCCATTGATGTTCCCTACAAAAAGAGATACCAACCTCTCATCCGTTGATGATGCATCAGAAGGATCAGTTGTCCAACTTAAGGGGCGATTTAAAGTGACATCTGCTGACCTCAGTCCGAAGGCTAAATCTTTAGGTTCCCCATATTTTGGAGACCATAGCAGTTCACCAACCCAGAACTTTGCAGCCAGCTCTATTCTTCCCACACTTCATTTAATTTTGCATCAGAACACTATTCAAAGGGAAGAAATTGTTAAACTAATAAAGTATGTGGAGCAACCCTCTGGTAAACATGCAGAATCAACTGAGGCAGGCCCAGTTGATCTGTTGCAGTGTGAATTGCAGGTGCCTCCTGCAAATGCTAAGGGGAGGGAGCTACAGTCGCAGGTTATTCAGCTTCAACAGAGGTATATAGAGTAA 1929 0.4178 MAHSLGKIFPVSANDYELYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMILIEHPNLLRAHCSFTTGHHLWVVMPYMAGGSCLGIMKSNYTEGFEEPVIASLLREVLKALVYLHAHGHIHRDVKAGNILIDSDGAVKLADFGVSTCMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVATCLVKDPKKRPTSEKLLKHHFFKHARSTDYLSNTILDGLPPLGDHFRMLKAREADLLMQNKALYENKDQLSQQVYIRGISAWNFNLEDLKSQAALIQDDNMLNVEETETSKQKDVDNRTPENGPSDKALDRSSATPTKGKEDGLNDLQDLENSLASFPIKPLQALKDCFDVGGEDGDETSPRELDKEDENEVVESSGQSSFIPNDVEIEHKKFSSGSLLPDNFFSHKKAMADSDRDHPHSLYHGRTHSGPLMFPTKRDTNLSSVDDASEGSVVQLKGRFKVTSADLSPKAKSLGSPYFGDHSSSPTQNFAASSILPTLHLILHQNTIQREEIVKLIKYVEQPSGKHAESTEAGPVDLLQCELQVPPANAKGRELQSQVIQLQQRYIE* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00950 642 MobiDBLite consensus disorder prediction 425 448 - -
Pte13g00950 642 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Pte13g00950 642 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Pte13g00950 642 FunFam Serine/threonine-protein kinase BLUS1 6 93 - -
Pte13g00950 642 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00950 642 MobiDBLite consensus disorder prediction 361 400 - -
Pte13g00950 642 MobiDBLite consensus disorder prediction 423 453 - -
Pte13g00950 642 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 8 637 IPR047173 GO:0043539
Pte13g00950 642 MobiDBLite consensus disorder prediction 361 380 - -
Pte13g00950 642 Gene3D Phosphorylase Kinase; domain 1 6 92 - -
Pte13g00950 642 SUPERFAMILY Protein kinase-like (PK-like) 13 318 IPR011009 -
Pte13g00950 642 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00950 642 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00950 642 Gene3D Transferase(Phosphotransferase) domain 1 97 296 - -
Pte13g00950 642 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00950 Pte-Chr13 8972176 8989078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00950 7 640 MAP Kinase Kinase Kinase Kinase AT5G14720 65.138 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pte13g00950 Pkinase 4.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00950 K08835 - qsa:O6P43_004628 899.812