Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00947 AAGATGAATCTCCGTGAGTACATGGTCACTCTTGATAAACCTTTTGGCATTCGCTTAGCTCTTTCAGCTGATGGCAAAGTCTTCGTACACGCACTGAAGAAAGGGGGAAATGCGGAGCAGTCCAGGATAATTATGGTCGGCGACTTTTTGAAGAAAGCTTTTGCTTCATTTGGAGGAGACCTCATCGAGATCAAAGATTACGGTCATGCAGAGAAGTTGATGAAGGAGAAAGCAGGATCTTATAGCCTGTTGCTTGAGAGACCATCCTTTCCTTTCCCTATTCACAAACTGTATAACTTGAGTGATCTTGATGTATTATTCAATAGAGGTCGAGTTCCTATTGCCACTTGGAACAAGAATCTAATGTCATCGAACTTACAGACATCTTCTGAAAGCTCTACAAATTATGGAATTTTACTGTTCTCCTCAAAGTTTCTGACGTCAAAAGGATTAAGATTGTTAAATAATCAAGCCGGATTGACAGATAAACTTATGCCTTCCATAAGTCAACTTGCGTGCATCTTTTATGAAGAAGATTCTGAAGATGAGAACTGGGGTCATGGGAGCTTTCCACTCGATGAATATGTCAAGGCACTAGAACGTTCTAAGGATGAGATGCACTATGATCACTCCATAGGCATGCGATATAGTAAGGTCACAGAGCAATTATACGTGGGATCTTGTATACAAACAGATGCTGATGTGGAGACCTTGTCAAAAGTTGTGGGAGTCTCTGCTATAATAAATTGTCAAGGTGGAGTTGAAGCTGAAAACTGGGGCATTGATGTGAAGTCAATAAATGAATCGTGTGAAAGGAATGACATTCTTATGATCAACTATCCTATAAGAGGCGGGGATTCCTTTGATACAAGGAAGAAGCTCCCATTTTGTGTGGGCCTACTATTGCGCTTGCTCAAGAAGAATCATCGGGTTTTTGTTACGTGTACTTCAGGACTGGACAGATCTCCTGCTTGTGTGATTGCATACCTGCACTGGATGACAGACACATCTCTTAATGCAGCTTATAATTTTGTCACTGGATTGCATGCATGCAAACCTGACAGGCCTGCAATTGCTTGGGCAACATGGGATCTTATTGCTATGGCTGAAAATGGTGTGCATGATGGACCTCCCACACATGCTGTAACCTTTGTGTGGAATGGGCAAGAGGGAGAGGATGTAAATCTTGTTGGAGACTTTACTGGAAATTGGAAAGAACCTGTAAGAGCAGTGCACAAAGGTGGATCAAGATATGAGGTCGAAATTAGACTTCCACACGGAAGATATTACTACAAGTATATCGTCAATGGTCAATGGAGACATTCAATGAATTCTCCGTCAGAAAGGGATGAAAGGGGGAATGTGAACAATATAATTGTGATTGGTGATACAGCTAGCGTGAGGCCTTCGATTCAACATCCGAAGAAAGATGTGAACATCATCAAGGTTATTGAGAGGCCTTTGACAGAAAATGAGCGATTTACACTGGCGAAAGCAGCTCGTTGTGTTGCATTTTATGTTTGTCCAATCCGACTAGCCCCCAAG 1545 0.4194 KMNLREYMVTLDKPFGIRLALSADGKVFVHALKKGGNAEQSRIIMVGDFLKKAFASFGGDLIEIKDYGHAEKLMKEKAGSYSLLLERPSFPFPIHKLYNLSDLDVLFNRGRVPIATWNKNLMSSNLQTSSESSTNYGILLFSSKFLTSKGLRLLNNQAGLTDKLMPSISQLACIFYEEDSEDENWGHGSFPLDEYVKALERSKDEMHYDHSIGMRYSKVTEQLYVGSCIQTDADVETLSKVVGVSAIINCQGGVEAENWGIDVKSINESCERNDILMINYPIRGGDSFDTRKKLPFCVGLLLRLLKKNHRVFVTCTSGLDRSPACVIAYLHWMTDTSLNAAYNFVTGLHACKPDRPAIAWATWDLIAMAENGVHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVRAVHKGGSRYEVEIRLPHGRYYYKYIVNGQWRHSMNSPSERDERGNVNNIIVIGDTASVRPSIQHPKKDVNIIKVIERPLTENERFTLAKAARCVAFYVCPIRLAPK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00947 515 CDD E_set_AMPKbeta_like_N 382 461 - -
Pte13g00947 515 SMART dsp_5 215 366 IPR020422 GO:0006470|GO:0008138
Pte13g00947 515 SUPERFAMILY E set domains 379 462 IPR014756 -
Pte13g00947 515 Pfam Glycogen recognition site of AMP-activated protein kinase 382 463 IPR032640 -
Pte13g00947 515 Gene3D Immunoglobulins 369 465 IPR013783 -
Pte13g00947 515 Gene3D Protein tyrosine phosphatase superfamily 208 472 IPR029021 -
Pte13g00947 515 CDD DSP_laforin-like 214 360 IPR045204 GO:0019203
Pte13g00947 515 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 4 513 - -
Pte13g00947 515 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 207 346 IPR029021 -
Pte13g00947 515 Pfam Dual specificity phosphatase, catalytic domain 233 354 IPR000340 GO:0008138|GO:0016311
Pte13g00947 515 ProSiteProfiles Dual specificity protein phosphatase domain profile. 215 371 IPR020422 GO:0006470|GO:0008138
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00947 73 515 Protein tyrosine phosphatase (PTP) family AT3G01510 69.042 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00947 - - jre:108992878 817.764