Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00940 ATGGATATGGCATTCTTCTTACAGGATATACTGCCCGTATTGGTAATGTTTGTAGGGGAGACTGCAGATGTGGGCGTATCGACTATAAGCAAAGTAGCCATGACAAATGGCTTGAGTACATATGTGTTTGTTCTCTACTCAAATGCCCTTGGAACCATTCTCCTTATTCCTTATCTCATTCTAAAAAGAAACAAGTTTGCACCAATGTCCGTGCCAATTTTTGGTGGGTTCCTCCTTCTCGGTCTAATGGCGAGTGTGATTATGGTGGTGGGATATACAGGTGTCAGGTTGAGCTCACCTACGCTATCGTCTGCCCTATCAAATCTTGTCCCGATTTTCACTTTCCTGATTGCAGTTGCATTGAGGATGGAAAAGCTGGATTTGAGACAGACTGTGAGTCAGGCCAAGTCTTTGGGTGCCATTGTTACACTAGCTGGAGCCCTCCTAGTCACTCTGTACAAGGGGCCCCCAGTGTTCAAGAATTTATTGTCTTCTTCCCCATTAAGAGAGGAGCCTCATGTACGATGGGTCTTGGGTGGTTTTCTCATTACAATCGGCTGCATTCCTTCTGCTTTTTGTTTTATCCTTCAGGCATACCTCTTGAAGCGGTACCCATATGAAGTTACTATGACTTGCTTAAGCAATTTCTTTATTACCATTTTCTGTGCAATTTATGCACTAATTGCAGTAAGAGACCCCGAGGCGTGGAAATTGAAGTCTAGTACTCAGATCATGGCTGTCATCTTCTCTGCTGTGGTTGGGAGCATTTTCCGTACCACTGTTTATGCATGGTGCTTGCGCAAGAAGGGGCCTTTTTTTGTTGCCATGTTCAAACCTGTGAGCATTGTTATTGCAGTGGTTATGGCAATTATGTTCCTTGGTGACACTATTTATGCTGGCAGCTTGCTTGGTTCGTTTTTAGTTGCAGTTGGATTTTACACTGTCATGTGGGCACGAGTTAAGGAGAATGATGATCGCAACGTTGAAGAAGCAATATGCAGTTCTGATATCGAGCCAGCAACTCAGAGAAAGCCTCTTCTAACAGCCAGCACAGCGGTAGATGTTGGGGGTACTTCATCAATGGCGGATTTAACATATAACTTCATACACAAAGCACAAAGTGGATTTACTAGTTCATTTGTGTTTCTAATTTGCAGAAGGAGAAGACCGCTGACTTTTGCTGTCCTCTGCAAGTTCTTTCTTCTTGGCTTTTTGGGGATTTTCGTAGTTCAGAATCTTGCATTTTTGGGCATATATTTCAGCTCTCCTACACTTGCTTCAGCTTTGGGAAATCTTGTTCCAGTTATTACTTTTTTAATTGCTATTACATTGAGGATGGAGAAGTTTTCTGTGAGTGCAAGTAGTAGTCAAGCTAAAATCATTGGCACATTAGTGTCCATTGGTGGAGCATTGATGGTGACTCTCTACAAGGGTCCAACCATTTTTAAGGTCTCCCCTCCTCACAATTTGCTCTCTTCCTCTGACAAATCCAACTGGGTTCTTGGAGGACTACTTATTACAATAAGTTGTCTATCATCTGCAACGTGGAGTATATTTCAGGCAACAACTTTAAATGAATACCCAGAGAAGATGTTGTTAGTGTTCTTCTCTTGTTTGTTTGGAACTACACTATCTGTGATTTTCTCTTTGATAATAGAGACAGATTCAAGTGCTTGGATTCTCAAACCTGGCATTCAAGTAATAGCTACAGTATACTCGGCACTTTTTTCTTGTGTGATTAGAGGTATCATTATAGCGTGGTGTTTGCAGAAGAAGGGGCCTGTGTATGTAGCCCTTTTCAAACCATTGGCCACAGTCATTGCTGTGATCATGGCACTACTCTTCCTAGGAGAAATCCTTCACATTGGCAGTTTGTTGGGAGCATCAATAATTGCTATTGGATTTTACACATTCATGTGGGGTAAAGCCAGGGAAAGGGACATGATGGTTCCAGACATCACGGCTACGTCGGAATCATCGAATGCCCCTCTCATTTTGAAGTGA 2004 0.4247 MDMAFFLQDILPVLVMFVGETADVGVSTISKVAMTNGLSTYVFVLYSNALGTILLIPYLILKRNKFAPMSVPIFGGFLLLGLMASVIMVVGYTGVRLSSPTLSSALSNLVPIFTFLIAVALRMEKLDLRQTVSQAKSLGAIVTLAGALLVTLYKGPPVFKNLLSSSPLREEPHVRWVLGGFLITIGCIPSAFCFILQAYLLKRYPYEVTMTCLSNFFITIFCAIYALIAVRDPEAWKLKSSTQIMAVIFSAVVGSIFRTTVYAWCLRKKGPFFVAMFKPVSIVIAVVMAIMFLGDTIYAGSLLGSFLVAVGFYTVMWARVKENDDRNVEEAICSSDIEPATQRKPLLTASTAVDVGGTSSMADLTYNFIHKAQSGFTSSFVFLICRRRRPLTFAVLCKFFLLGFLGIFVVQNLAFLGIYFSSPTLASALGNLVPVITFLIAITLRMEKFSVSASSSQAKIIGTLVSIGGALMVTLYKGPTIFKVSPPHNLLSSSDKSNWVLGGLLITISCLSSATWSIFQATTLNEYPEKMLLVFFSCLFGTTLSVIFSLIIETDSSAWILKPGIQVIATVYSALFSCVIRGIIIAWCLQKKGPVYVALFKPLATVIAVIMALLFLGEILHIGSLLGASIIAIGFYTFMWGKARERDMMVPDITATSESSNAPLILK* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00940 667 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 320 - -
Pte13g00940 667 PANTHER WAT1-RELATED PROTEIN 11 323 IPR030184 GO:0016020|GO:0022857
Pte13g00940 667 Pfam EamA-like transporter family 26 150 IPR000620 GO:0016020
Pte13g00940 667 Pfam EamA-like transporter family 502 637 IPR000620 GO:0016020
Pte13g00940 667 Pfam EamA-like transporter family 179 316 IPR000620 GO:0016020
Pte13g00940 667 SUPERFAMILY Multidrug resistance efflux transporter EmrE 379 477 - -
Pte13g00940 667 SUPERFAMILY Multidrug resistance efflux transporter EmrE 558 645 - -
Pte13g00940 667 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00940 Pte-Chr13 8701392 8755335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00940 386 661 Nodulin-like Gene Family AT3G28050 43.165 1.34e-66 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00940 - - pper:18784409 541.576