Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00931 ATGGAACTCAACGATTCTACTGGAGAGCTCAGAGACCTGAACGAGTTAGGAGCAACTCGTTCTGGTCTTGGGATTGACCTCAATGAGACCCCTTCCCCTTCGTTCATCGAAACCCTACCGGATTCTATAGACATCGTACGTACTTACCATGAGAATCCACCGCCGCCGCCAGGAGAACCGGTTTGGATTCCGGGTGAGGGCAGAGGTGCAGCTTGCGCTGTGTGTGCTAAGCCGGAGGTGAGAGGGCATGTGGTTGTTTGTGATGGATGTGACCGCGGGCATCATTTGGGCTGTGCGGGAATGCGGGGCCGTCAAGAGTTTTGCCTTGATGAATGGCTTTGTGAGGAGTGCTTGTCGACTGGTATCAAGAGTAAACGGTGGCCTTTGGGTGTGAAGTCCAAGCAGATTTTGGATATCAATACTTCCCCACCTAGTGATGGGGATGACGATGGAAACGAGGACTTGTGGGAATTGAGAAAGCACACTCTGGATGGTAATTCTTTTGGTGCCAATCTATGTGGTGCCCCAGTGACATGTTCAAAGTTCTCCAATGGCTACGTGGCACAAGCTGCCAAACTTGGTTTTGAGGATATAATAAATCATACCTCCACAGTGGATAGAAGTCTCCAAGAAGCAGATTTGAATTTTTCAATGGGAAAGCATAGGAATAGTAATAATACAGCTGTTAGACGTCCACGTCGGACAACAAGTGAGATACTTTTGCGGTCTCTTAAAGAATTTGTATCTGATCGGGATGGTGTGTTGGAGGAAGGTTGGCATGTAGATGTAAGACAATCTACGAATAGTTCTGATGTATATGCAGTATATTGCGCTCCCAATGGGAGGTTGTTTGATTCTGTGATTGAAGTTGCCAGTTATCTTGGGTTGATGTCAAACGACAATTATGCTGAGCCTGCTATAAGAAATGAGAGGTCTAGTTTTAAAATGGAAGGGTCACATATTTCTAGAAAAAGAAAATCAGCGAGGTGTCCAGTTCGAAATGGTTCTGTTGAAAGGAAGAATGCCTCTATTAGTTGTTATTGCAAGGAATCTTCTGCTAATGGTGGAAGAATGGAGTGCCCAAATGCATGTGAAAGTACGTCTCAAGTTTCTGAAACAGGGCTAAAAGATGAGAACACCTCGGGTTATCAGCATCAGCAGGAAGAAGATGGACTTCCTCTGCAGTTTGCAGATTTCTTTGTGATTTCTATGGGAAAGATTGATGCTAGACCTTCATATAATGATGTTAACATCATCTGGCCAGTAGGTTATAAATCATGTTGGCATGACAAGATTACAGGTTCTATTTTTACATGTGAAGTTTTGGATGGTGGTGATTCTGGACCTTTATTTAAAGTGAAAAGATGTTCCTGCTCTGGTACCCCTGTACCTGTTGGGTCAACCATCCTATCTTTGGCTAAGCCTACAGAATTAGTTCGTGAAACTAATGAAGAAGATAAAATAAGATCTTACGATAATTGGGATGGTGATAGCACAATCCAAATGATCTTTTCTGACCCCTGTCTCCCTATGGACAATGATATTTTCAGTTGTCTGACGAATCCTTCTAATAAGGCTTCTGATTCACAGCTACAGGAATTATTGCTGCCCACCATGGTTCAAAACCAAGCTGTAATTTCCATTCATATTGAAAGGGAACAGACTGATGAAATTGGTGAGATTTCAGCTGAAGAGTGCTCATCTTCGCTGGCATGGAACTTATTATCCAAAAAATTTGTCGACGTTTGCTCAGAAATCTATAAGCAGAAAGGGACTCTGAAGTTCTTCTGCAAACATGCTGAAAGCGAAAAATGCCATTTAAAATGGGACATGGAAAATGCAAACAGTATGAGCAATTCTCTTTCAGCTTCATTTGCCAAATTTTATGGTTCACCTGGTTTTGCGAGCATCCCTTCCATTGTTCAGGTGGACCATGAATTAAATGTGATGGTAGAGGCCGTTTCAAAATGGTTGGATCAGGACAGATTTGGATTAGATATGGCTTTTGTCCAAGAAATATTAGAACAGCATATGGGTGCCCAAGATTGTAAGTATCAATTTCTTAATACAAGAAATGACTACATTACATCATGGACTGTTAGTAATGGGTTTCTTGTGATGGAAGCAACTGATCAATTGCAATACAATGAAGAGGGAGCATCAAATGGCTTATGTGATAGATTGAAGAGGGCAAGGTTGGCTGAGGAACCTACCATATGTACTCGTTGTCCTCCTCAGGGGAAGCCAGTGTGCTCTAGGGTTCCTTCTGAGCTTGTTGGTGATGTTTTTCAGGCATGGGAGCTCTTATGCCGATTCCAAGACACTTTGGATCTTAAGGAGTCAATTTCCTTGGTTGATTTGGAAGAGGAGCTTATGAGCCCTTGGTTTGATGGCTTGAAATCTTGGGGGAAGTTTGAGAAAAAAACCCAAGGGCATCAAATTTCAAGTGTGCAAGGAGTTGATCGCGGTGGAGAAACCATCTTCTCAGTGAGCTCTGAATCTGAGTCTAAGGTTTCAAAAGGAAATCCCCATGTGTTTATTCCAATGGAAACAGAAGCCATGAAAGAGGAAGTTCAAGTGAAACTGGCATCTTCTACTTACAGCAGATGCTATGGTGTAGCTTTGACAAAGGCACATATTGCACTGTTAGGGGTGCTAATTAGTGAGCTGCAGACCAAGGTTGCTGCCTTGGTAGATCCCAACTTTGAACTCGGAGAGTCAAGACCAAAGCGAGGAAGGAAGAAAGATATTGATCCTAGCATATCTTCAAAACGAAGCAAGCTCAATATTCTACCTGTTAATGAACTGACTTGGCCTGAATTAGCTCGAAGATATGTGTTGGCTGTTCTGTCCATGGATGGAAACCTTGACTCAGCAGAGATCACTGCTCGAGAAAGTGGTAAAGTGTTCCGTTGCCTACAAGGTGATGGTGGATTGCTTTGTGGCTCTCTTACAGGAATAGCTGGGATGGAAGCAGATGCACTGCTGCTTGCAGAGGCCTCAAAGCATATATTTGGTTCTATTACCAAAGAAAGTGAAATATTAACCATAAAAGGTGAAGGATCAGAGGTGACAAGTGCTAGTGAGAAGGATTTAGTAAACAATGGTGATATTCCTGAATGGGCAAAGTCGCTGGAGCCTGTGAGGAAACTGCCTACTAATGTTGGAACTAGAATTAGAAAGTGCATTTATGATGCTTTGGACAAGAATCCACCTGAGTGGGCGAGGAAAGTATTGGAGCATTCAATCAGTAAAGAGGTGTATAAAGGCAATGCATCTGGACCCACAAAGAAAGCTGTTCTGTCAGTGCTCAGCATTGTTTGGCATGATGGATCGGAACAGAAGCCTGCTAAGGCGACAAAAAAGAAGATTGTTATCTCTGTTTCTGACATTATAATGAAGCAATGTCGAATTATCTTACGCCGTGCTGCAGCAGTCGATGATGCAAAAGTTTTCTGCAATTTGCTTGGTAGAAAACTGATCAATTCTTGTGATAATGATGATGAAGGGCTTCTTGGATCTCCAGCCATGGTGTCTCGTCCTCTTGATTTTAGGACAATAGATTTAAGATTGGCTACTGGGGCCTACGGTGGATCTCATGAAGCTTTCCTTGAGGATGTTCGGGAGTTATGGCATAATCTACGAATTGCATATGGTGACCACTCGGATTTAGCTGAATTGGCAGATAAATTATCTGCCAACTTTGAATCCTTATATGCAAACGAGGTTGTGAGATATGTTCAGAAATTCATGGATTATCCTAAAGCGGAATGCTTGAGTGAAGAAATGAGGAAAGAACTAGATGAGCTAACTGCTTCTTTGAGTGAAGTTCCTAAAGCCCCTTGGGACGACGGAGTTTGTAAAGTATGTGGTGTTGATAAAGATGATGACAGTGTTTTATTGTGTGATACCTGTGATGCTGAATATCATACTTATTGCCTGAATCCTCCCCTTGTAAGGATCCCTGAAGGAAACTGGTATTGTCCTTCTTGTGTCGTCAGTAAACATATGGCCCAAGATGTTTCAGGACTTCAACAGGTTCCTCAACGGCAGGCCAATAAATTTCGAGAAGTGACTTCTGTTTACAAGGAGGCTCTTGCACATATATCAGCAGTAATGGAAGAAAAAGAGTACTGGGAGTACAGTCCCAGTGAGCGAGCCTTCCTGCTCAATTTTTTGTCTGACGAGTTACTGAATTCAACCCTCATCCGCCAGCACCTTGATCAGTGTGCTGAGTTGTCTGCTGATTTGAATCAGAAACTGCGATCCTTTTATTTCGAGTGGAAAACTCTCAAAATAAAGGAAGATATAATTTCTGCAAAAGCTGCAAGGATGGACTCTTTCCCTATGAGCGTGGCTGGCAATGTTGGTGTCAAGGAAGGGTTTTCGACTTCGATGACACATTCTAGTAAATCTTTAGTTCAGCAGCATAGTTTGAGCGATAAATCTAATCATTTTGTTGTACTCCCAGAAAGTCATGCTTCACAGGAGGCTGGTAAAGAGAAGAGTACTTCAAATAGTGGTGACAGTGCTAAAGTAGTTACAAAGGAGACTGATGGTCGACATACAAATCCCAGTTTTGTTGGAGGACAGATGATAGATGTTTCTGCTCCTTCAGATGCGAACAAACGATCTCCGAATCTTACCTCCACTGGTACTGATGCACCTAATAAATCAAGTCAGTCATCTTTGTCAAATGATTTTGGTTCTCTGGGTCCCAGGAATGAATCATGTTCCTATCAACTTGAGTTGAATGCAATAAAAAATGACATTTCACTTCTCAGGGACTCTATAATGACTGTAGAATCACAACTTTTCAAGCTATCTTTTAGGAGAGAGTTTTTGGGCATTGATTCCATTGGTCAGCTGTACTGGGCTTCAGCCATCCCTGGAGGATGTCCTTGTATTATTGTTGATGCAACTGCTGCCATGATGCATGGAGGAAAATCATTAAACCACAATGATCATGGGAGCAAGTTTCCTTTTCTGCGGAACTGTGCTCCATTTAAGGGGACCTTTTCTTCGCTAGTGGTGCCTAAAGTTGGTACCTCTTGTGGAAGGAGTAATGCTTTGAGCCTGTCTTCACTACGCATTTCTTATCACACTGATGCAGATGTCGACTTGCTGGTAGACTGGCTCAGGTATAATGATCCCAAAGGAAGAGAACTTAGAGAATCCATCATCCACTGGAAAAAGGTTAAATCTCAAGGAGCCTCACACACCAGAAGTCAAGCTCTAATGGAGCAGCATGTTGGTTCTTCTATGCCAATAAATATTGAAAATGTCAATGATAGTTGTCTTGTTGCAAAGGCGACCACTTTCTTAGAGAAGAAATATGGGATTTGCATTGAATTTGACCCTATTGACATCTCCAAGAAATTGGGCAGAAAGGCTAAAGAAACTAATGAAGAAAAACCATACAGGTGTGAATGCCTAGAACTAATTTGGCCTTCTCGGCAACATTGTCTTTACTGCCACAGAACTTTCTTGAGTAATATGGAGCTGGAAGGGCACAATGAGGGGAATTGCTCTGTAGTTCCGTCAACCTCTGAAAAGAGCAAGGATGTTAATGAACTTTCAAAAGGGATAAAGATTAAAAAAAGCGAGGCCATCCGCAATGGGTACAGAAGTGATGCTGACACTGTCACAACCTCCAAAAAAGGGTCCCCTAAACTTGCCCCAGGTTTGATTATATTTCAGAATGAAGATCAGTTGTGTCCACACAATTATGAAGATATATATTCGAAGTTTGTGACGAATGATTCCAATAGAGAGCTTATTAAAGAAATAGGCCTCATTGGTTCAGATGGGGTTCCATCTTTTGTCCCATCTGTTGCCCCTTTTGTTAGTAACTCTGCGCTAATGTTAATGACTTCTCAAGAGGATGGCGGAGTCACTGGGGAATGGTCAAAAGCTTCTGACGGGAAGATTCCCCAGGGAAAAATAAATGTACCTTCTTCATGTGGTAAAGAAATAGCTGAAAAAACTTCAGCAGATGAAATCAATAAGTCAACGGAATCTACTAAACCAACCTGTCAAACTAGAGACCTTGGTGATGGTCATTGCTGTGTTGTTCCCCTGTCCTCATTGAGACCATTAGTTGGCAAAGTTTCTCATATTTCAAGGCAACTGAAGATCAATCTACTTGACATGGATGCTGCACTCCCAGATGATGCTTTAAGACCATCAAAGGCACAGCTAGAAAGAAGATGGGCTTGGCGAGCATTTGTTAAATCTGCAGGCACAATTTTTGAGATGGTGCAGGCAACAATCATATTGGAGGACATGAATAGACAGATACTTGAGGATTGA 6312 0.4224 MELNDSTGELRDLNELGATRSGLGIDLNETPSPSFIETLPDSIDIVRTYHENPPPPPGEPVWIPGEGRGAACAVCAKPEVRGHVVVCDGCDRGHHLGCAGMRGRQEFCLDEWLCEECLSTGIKSKRWPLGVKSKQILDINTSPPSDGDDDGNEDLWELRKHTLDGNSFGANLCGAPVTCSKFSNGYVAQAAKLGFEDIINHTSTVDRSLQEADLNFSMGKHRNSNNTAVRRPRRTTSEILLRSLKEFVSDRDGVLEEGWHVDVRQSTNSSDVYAVYCAPNGRLFDSVIEVASYLGLMSNDNYAEPAIRNERSSFKMEGSHISRKRKSARCPVRNGSVERKNASISCYCKESSANGGRMECPNACESTSQVSETGLKDENTSGYQHQQEEDGLPLQFADFFVISMGKIDARPSYNDVNIIWPVGYKSCWHDKITGSIFTCEVLDGGDSGPLFKVKRCSCSGTPVPVGSTILSLAKPTELVRETNEEDKIRSYDNWDGDSTIQMIFSDPCLPMDNDIFSCLTNPSNKASDSQLQELLLPTMVQNQAVISIHIEREQTDEIGEISAEECSSSLAWNLLSKKFVDVCSEIYKQKGTLKFFCKHAESEKCHLKWDMENANSMSNSLSASFAKFYGSPGFASIPSIVQVDHELNVMVEAVSKWLDQDRFGLDMAFVQEILEQHMGAQDCKYQFLNTRNDYITSWTVSNGFLVMEATDQLQYNEEGASNGLCDRLKRARLAEEPTICTRCPPQGKPVCSRVPSELVGDVFQAWELLCRFQDTLDLKESISLVDLEEELMSPWFDGLKSWGKFEKKTQGHQISSVQGVDRGGETIFSVSSESESKVSKGNPHVFIPMETEAMKEEVQVKLASSTYSRCYGVALTKAHIALLGVLISELQTKVAALVDPNFELGESRPKRGRKKDIDPSISSKRSKLNILPVNELTWPELARRYVLAVLSMDGNLDSAEITARESGKVFRCLQGDGGLLCGSLTGIAGMEADALLLAEASKHIFGSITKESEILTIKGEGSEVTSASEKDLVNNGDIPEWAKSLEPVRKLPTNVGTRIRKCIYDALDKNPPEWARKVLEHSISKEVYKGNASGPTKKAVLSVLSIVWHDGSEQKPAKATKKKIVISVSDIIMKQCRIILRRAAAVDDAKVFCNLLGRKLINSCDNDDEGLLGSPAMVSRPLDFRTIDLRLATGAYGGSHEAFLEDVRELWHNLRIAYGDHSDLAELADKLSANFESLYANEVVRYVQKFMDYPKAECLSEEMRKELDELTASLSEVPKAPWDDGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLVRIPEGNWYCPSCVVSKHMAQDVSGLQQVPQRQANKFREVTSVYKEALAHISAVMEEKEYWEYSPSERAFLLNFLSDELLNSTLIRQHLDQCAELSADLNQKLRSFYFEWKTLKIKEDIISAKAARMDSFPMSVAGNVGVKEGFSTSMTHSSKSLVQQHSLSDKSNHFVVLPESHASQEAGKEKSTSNSGDSAKVVTKETDGRHTNPSFVGGQMIDVSAPSDANKRSPNLTSTGTDAPNKSSQSSLSNDFGSLGPRNESCSYQLELNAIKNDISLLRDSIMTVESQLFKLSFRREFLGIDSIGQLYWASAIPGGCPCIIVDATAAMMHGGKSLNHNDHGSKFPFLRNCAPFKGTFSSLVVPKVGTSCGRSNALSLSSLRISYHTDADVDLLVDWLRYNDPKGRELRESIIHWKKVKSQGASHTRSQALMEQHVGSSMPINIENVNDSCLVAKATTFLEKKYGICIEFDPIDISKKLGRKAKETNEEKPYRCECLELIWPSRQHCLYCHRTFLSNMELEGHNEGNCSVVPSTSEKSKDVNELSKGIKIKKSEAIRNGYRSDADTVTTSKKGSPKLAPGLIIFQNEDQLCPHNYEDIYSKFVTNDSNRELIKEIGLIGSDGVPSFVPSVAPFVSNSALMLMTSQEDGGVTGEWSKASDGKIPQGKINVPSSCGKEIAEKTSADEINKSTESTKPTCQTRDLGDGHCCVVPLSSLRPLVGKVSHISRQLKINLLDMDAALPDDALRPSKAQLERRWAWRAFVKSAGTIFEMVQATIILEDMNRQILED* 2104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00931 2103 ProSiteProfiles Zinc finger PHD-type profile. 69 120 IPR019787 -
Pte13g00931 2103 Pfam PHD-finger 1286 1332 IPR019787 -
Pte13g00931 2103 ProSiteProfiles FYR domain FYRN motif profile. 391 444 IPR003888 GO:0005634
Pte13g00931 2103 ProSitePatterns Zinc finger PHD-type signature. 72 117 IPR019786 -
Pte13g00931 2103 Gene3D - 1113 1241 IPR036427 GO:0005515
Pte13g00931 2103 CDD PHD1_Lid2p_like 1286 1331 - -
Pte13g00931 2103 PANTHER OS02G0192300 PROTEIN 14 2097 - -
Pte13g00931 2103 SMART PHD_3 71 118 IPR001965 -
Pte13g00931 2103 SMART PHD_3 1286 1332 IPR001965 -
Pte13g00931 2103 SUPERFAMILY FYVE/PHD zinc finger 1273 1336 IPR011011 -
Pte13g00931 2103 Gene3D - 208 343 - -
Pte13g00931 2103 SUPERFAMILY Bromodomain 1121 1241 IPR036427 GO:0005515
Pte13g00931 2103 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1242 1344 IPR013083 -
Pte13g00931 2103 MobiDBLite consensus disorder prediction 1499 1513 - -
Pte13g00931 2103 Gene3D - 392 497 - -
Pte13g00931 2103 Pfam Methyl-CpG binding domain 246 299 IPR001739 GO:0003677
Pte13g00931 2103 ProSiteProfiles Zinc finger PHD-type profile. 1284 1334 IPR019787 -
Pte13g00931 2103 CDD PHD_SF 72 117 - -
Pte13g00931 2103 ProSitePatterns Zinc finger PHD-type signature. 1287 1331 IPR019786 -
Pte13g00931 2103 ProSiteProfiles Bromodomain profile. 1177 1225 IPR001487 GO:0005515
Pte13g00931 2103 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 139 IPR013083 -
Pte13g00931 2103 Pfam Bromodomain 1175 1230 IPR001487 GO:0005515
Pte13g00931 2103 SUPERFAMILY FYVE/PHD zinc finger 69 129 IPR011011 -
Pte13g00931 2103 MobiDBLite consensus disorder prediction 1538 1570 - -
Pte13g00931 2103 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 245 319 IPR001739 GO:0003677
Pte13g00931 2103 MobiDBLite consensus disorder prediction 1492 1570 - -
Pte13g00931 2103 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1364 1408 IPR028942 -
Pte13g00931 2103 CDD Bromodomain 1132 1239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00931 Pte-Chr13 8353434 8366429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00931 1 2096 C2H2 Transcription Factor Family AT3G01460 43.003 0.0 1573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pte13g00931 Bromodomain 3.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00931 K22768 - zju:107415421 2164.81