Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00896 ATGGCTCTACTGCTAATAGCCATCTCTCTGTTCTTTGTCTGTCTTGCTTATGCGCTGTATGATAGGCTAAGGTTCAAGCTACCACCTGGTCCACGCCCATGGCCGATTGTGGGTAACCTTTATGATATCAAGCCCGTGAGATTCCGGTGCTTTGCAGAGTGGGCTCATGCTTATGGTCCCATTCTATCAGTTTGGTTTGGTTCAACGTTGAACGTGATCGTGTCCAATACAGAGTTGGCTAAAGAGGTGCTCAGGGAACATGATCAGCAGTTGGCTGATAGGCATAGGAGCAGATCAACTGTCAAGTTCAGCAGAGATGGAAAGGACCTTATTTGGGCTGACTACGGACCTCACTATGTCAAAGTCAGGAAAGTCTGTACCCTTGAGCTCTTCTCACCAAAGAGGCTGGAGGCACTGCGACCTATTAGAGAAGATGAGGTTGCAGCCATGGTCGAATCCATTTTCAAGGACTGTACCAATTCAGGAAATCTAGGGAAAAGTTTATTGGTGAAAAAATACTTGGGAGCTGTGGGATTCAACATCATTTCAAGACTGGTATTTGGCAAAAGATTTGAGAACTCGGAGGGTATCATGGATGAACAAGGTATAGAATTTAAGTCTATAGTGGCCAATGGAATGAAGCTTGGATCACTGGCGATGTCAGAGCACATTCCTTGGCTAAGTTGGATGTTCCCACTTGACGAAGAGGCTTTTGCTAACCACGGTGCACGAAGAGACAAATTCACTCGGGCCATTATGGATGAGCACAAACAGGCACGCACGAGGAGCGGTGCCAATCAACACTTAGTTGGTGCATTGCTTACATTGCAAGACAAGTATGACCTCAGTGAAGATACCATCGTTGGCCTACTTTGGAACATGATCTCAGCAGGGACGGATACAGCTGCAATCTCTGTGGAGTGGGCTATGGCTGAATTGATTAAAAATCCAAGGGTACAACAGAAGGCTCAAGAAGAACTGGATAGAGTTATTGGGGTTGAAAGGGTATTGACAGAATCTGATTTCCCAAACCTACCTTACCTTCAATGTGTAGTCAAAGAGGCTCTAAGGCTTCACCCTCCAACTCCATTGATGCTGCCTCACAAGGCCAATACCAATGTGAAAATCGGAGGATATGACATCCCCAAAGGTTCAAATATTCACGTGAATGTTTGGGCAATCGGGCGTGATCCAAGTGTGTGGAAGGAACCAACAGAGTTCAGGCCAGAGAGGTTTTTTGAGGAAGATGTGGACATGAAGGGTCATGATTTTAGGCTTCTTCCATTTGGGGCAGGTCGCAGGGTATGCCCTGGTGCACAACTTGGTATCAATTTGGTGACATCTATGTTAGGTCACCTGTTGCACCATTTCTCTTGGAACCCTCCGAAAGGGGTGAAGCCAGAAGAGATTGACTTGTCAGAGAGTCCTGGAATGGTCACTTACATGAAGACCCCCGTCGAAGCTGTGGCCACTGCTAGGCTACACTCAAACCTCTACAAGTGTGTGCCTGCATTTACTTGA 1521 0.4661 MALLLIAISLFFVCLAYALYDRLRFKLPPGPRPWPIVGNLYDIKPVRFRCFAEWAHAYGPILSVWFGSTLNVIVSNTELAKEVLREHDQQLADRHRSRSTVKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVAAMVESIFKDCTNSGNLGKSLLVKKYLGAVGFNIISRLVFGKRFENSEGIMDEQGIEFKSIVANGMKLGSLAMSEHIPWLSWMFPLDEEAFANHGARRDKFTRAIMDEHKQARTRSGANQHLVGALLTLQDKYDLSEDTIVGLLWNMISAGTDTAAISVEWAMAELIKNPRVQQKAQEELDRVIGVERVLTESDFPNLPYLQCVVKEALRLHPPTPLMLPHKANTNVKIGGYDIPKGSNIHVNVWAIGRDPSVWKEPTEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFSWNPPKGVKPEEIDLSESPGMVTYMKTPVEAVATARLHSNLYKCVPAFT* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00896 506 PANTHER CYTOCHROME P450 98A9 8 500 - -
Pte13g00896 506 Gene3D Cytochrome P450 21 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 FunFam Cytochrome P450 21 497 - -
Pte13g00896 506 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 SUPERFAMILY Cytochrome P450 28 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 CDD CYP98 58 488 - -
Pte13g00896 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Pte13g00896 506 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte13g00896 506 Pfam Cytochrome P450 28 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00896 Pte-Chr13 7796247 7820296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00896 1 503 Monolignol Biosynthesis Gene Families AT2G40890 74.455 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00896 K09754 - qsa:O6P43_006317 866.3