Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00895 ATGGATATGGTACGATCCTCCTCCCATCCCTCTTCAGAGTCAGAAGCTTGTGAGAAACAAATAGGAAGCGAAGGCTTAACGAAAAGAATTCTCAGAAGAGGCGTCTCTTGGCAGACTCCATTTTTCGGTGACGAAGTGGAAGTTCATTACAGAGGGCATGCTGAGAATGGGGAATCACTTGAATCAAGTTATGATAGAGGAGCTCCATTCAAATTCAAATTAGGCCAATGTGAAGTGATTAAAGGTTGGGATGAAGGAGTTGCCTCCATGAAGAAAGGCGAGAGAGCAATCTTCAAAATACCACCAAGCCTGGGTTATGGAGAAGCAGGGTTGCCACCCTTTGTTCCTCCCAATGCATCACTCATTTTTGAGATTGAGATGTTGTCATGGTGCAGTATCAGGGACTTGACCGGCGATGGATGTGTGGTGAAGAAAATACTAAGGGAGGGAGAAGGATGGGCTACTCCCAAAGAAATTGATGATGTCTTGGTTAAGTATGAGGCGAAGTTAGAAAATGGAACTGTTGTCTCCAAATCTGATGAAGGGGTGGAGTTTGGTTTAACTGCCGGTTTTTGTTTTCCTGCATTGAGCATAGCAGCAAAGACAATGAGAAAGGGTGAAAAAGCAGAGCTAGCTGTCAAGTTCATGTATGGATTTGGAAATAGAGAGAGAACCAATAAAAATGACAATTGCTTGGCAGCAGAATCGAACTTAATAATTGAAATTGAGCTGGTATCATGGAAAAGTGTAACTGATGTCTCAGGGGATATGAAGATTCTGAAGAGGATAAAAGTATCTGGTGAGGGTTATGATTGTCCGAATGAAGGGTCTCATATAAAAGTAATATACTTGTGTAAACTAGAAGATGGAACAGTTATTGAGATGAAGGGATCAGAAGAGCATCCATTTGAGTTCATCACAAATGAAGAGCAAGTACATGATGGATTGGTGAGAGCAATTCTGACAATGAGAAAAGGGGAAGAAGCCACAGTGATAATCAGTACTGAGTATTCATGCAACAATGACAATTGGCGAACAGTCTCTGGCAATAAAGTTATTTATTTTGAAGTTAAGCTAATAGACTTCTCTAAGGAAAAGCCATTTTGGAAAATGGACACTAAAGAGAAACTAGAAGCTTGTGAAAGGAAGAAGGGTGATGGAAACTTGCTGTTTAAAACTGGGAATTTTTTGCGTGCTTCCAAGAAATATGAGCAGGAAACAAAATATGTTGAGTTTGATCACACATTTGGCGACGATGACAAGTGCCGGGCAAATGCCTTAAGGTTATCCTGTTACTTGAACAATGCCGCTTGTAAACTAAAATTGGAGGCATATGCTGACGTTTCTAGACTCTGTTCAAAGGTGTTGGAAGATGACCAGTTCAACATAAAGGCTCTCTACAGACGATGTCAAGCTTACATACGAATGTCTGAGCTAGAGAAAGCTGAAGCTGATATCCAAAGAGCTCTCACAATTGATCCAAATAATAGAGACTTGAAAATGGAGTACAGGGAGCTAAAAAGTAAGCAAAGGGAATACAGCAAATGTCAGGCCGAGATCTGCAGCACAATGCTTTCAAAAATGGCTTATTGA 1593 0.408 MDMVRSSSHPSSESEACEKQIGSEGLTKRILRRGVSWQTPFFGDEVEVHYRGHAENGESLESSYDRGAPFKFKLGQCEVIKGWDEGVASMKKGERAIFKIPPSLGYGEAGLPPFVPPNASLIFEIEMLSWCSIRDLTGDGCVVKKILREGEGWATPKEIDDVLVKYEAKLENGTVVSKSDEGVEFGLTAGFCFPALSIAAKTMRKGEKAELAVKFMYGFGNRERTNKNDNCLAAESNLIIEIELVSWKSVTDVSGDMKILKRIKVSGEGYDCPNEGSHIKVIYLCKLEDGTVIEMKGSEEHPFEFITNEEQVHDGLVRAILTMRKGEEATVIISTEYSCNNDNWRTVSGNKVIYFEVKLIDFSKEKPFWKMDTKEKLEACERKKGDGNLLFKTGNFLRASKKYEQETKYVEFDHTFGDDDKCRANALRLSCYLNNAACKLKLEAYADVSRLCSKVLEDDQFNIKALYRRCQAYIRMSELEKAEADIQRALTIDPNNRDLKMEYRELKSKQREYSKCQAEICSTMLSKMAY* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00895 530 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 43 131 IPR001179 GO:0003755
Pte13g00895 530 SUPERFAMILY FKBP-like 258 382 - -
Pte13g00895 530 SUPERFAMILY FKBP-like 136 251 - -
Pte13g00895 530 FunFam Peptidylprolyl isomerase 368 522 - -
Pte13g00895 530 FunFam Peptidyl-prolyl cis-trans isomerase 18 131 - -
Pte13g00895 530 Gene3D Tetratricopeptide repeat domain 366 522 IPR011990 GO:0005515
Pte13g00895 530 Gene3D - 7 133 IPR046357 GO:0003755
Pte13g00895 530 ProSiteProfiles TPR repeat profile. 463 496 IPR019734 GO:0005515
Pte13g00895 530 PANTHER PEPTIDYLPROLYL ISOMERASE 16 129 - -
Pte13g00895 530 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 155 245 IPR001179 GO:0003755
Pte13g00895 530 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 273 360 IPR001179 GO:0003755
Pte13g00895 530 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 128 IPR001179 GO:0003755
Pte13g00895 530 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 276 363 IPR001179 GO:0003755
Pte13g00895 530 MobiDBLite consensus disorder prediction 1 21 - -
Pte13g00895 530 Gene3D - 134 248 IPR046357 GO:0003755
Pte13g00895 530 Gene3D - 249 364 IPR046357 GO:0003755
Pte13g00895 530 SMART tpr_5 463 496 IPR019734 GO:0005515
Pte13g00895 530 SUPERFAMILY TPR-like 371 522 IPR011990 GO:0005515
Pte13g00895 530 MobiDBLite consensus disorder prediction 1 18 - -
Pte13g00895 530 Pfam Tetratricopeptide repeat 464 496 IPR001440 GO:0005515
Pte13g00895 530 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 159 248 IPR001179 GO:0003755
Pte13g00895 530 SUPERFAMILY FKBP-like 18 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00895 Pte-Chr13 7779347 7783108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00895 18 528 Calmodulin-binding Proteins AT5G48570 49.423 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00895 - - gmx:100785412 737.258