Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00893 ATGACTGTCAACCTGGACATGGTTGAGGCGGAGACGGACACGTTAGTGACTCAGTCACCCTCGCAGCCATTCGAATTGGCTTCCGAATTCAATGATCTATCCTTCCCGTCTATGGATTCTTTGTTCGGCGGCAACGTTCTCAATTCTTCCGGTGCTGAATTAGGGTTTGGGGCATTTGGGCTAGATGGATGTGATGACTTGGAGATCGTCTTGGACGATCTTGATCTTTATTTCCCTGCTGAGAATGAACAGTTTGTTATTCCTAATGTTGACGGGTCTATGCCATCCGGGTCGGATCAAGAGGGAAATCCTGGTGCTGCACATGGTCTGAACTCTAAATCTAGCTGCTGCTCTGTTTCGTTGTTCCCTGAATCGGGTTGCTCTGGGGTTTCGGGCGATCAGAACGTGGATGTGGCAAGGTTTCTTAATTGTCCTCCCCACTCGGAGTCGGATGGTAGTGAACGGGAATATTTTCTACCGCAGTCTAGTGCGTCGATTACTCATTCTACTGATCAGAGCTCAAAAGATAATAAGGTTTCAGAAGGAGGTGGCTGTAATCCAGAGTCTTCTGATGAACCTGTCTCGTCTCAGGGTTCGGGAAATGGTGGGTCTGGTGTTTATGAAGTGATGAATGCGGCATCGCCTGATTGCGATCGGGATGTGTCGTCTACTATGTATGTTGATCCCAATGTTAAGATGGAGAATGAGAACATCTCTGCGCTCAAGAGGAAGAAAGAGCATGCAGAAGAGAATAACAACATCATCGAATTAAGAACTAGCAAGTACCGGAGGTCATCAACGATCATGGAAAGTGACGATCATGATGGTGGCAGTGTTGGGAACAACGAAGAAGAGAAGAGGAAGGCTAGGCTGATGAGGAATCGTGAAAGTGCTCAGCTTTCTAGACAGAGAAAGAAGCATTATGTTGAAGAGCTGGAGGATAAGGTTAGGTCAATGCATTCTACCATTGCTGATCTAAATAGTAAGATATCATTCATTATGGCTGAGAATGCCACTTTGAAACAGCAAATTGGTGGAGCGGGCATGTGTCCGCAACCGACTCCTGCGATGTACCCACATCCTCCAATGGCACCCCTGGGTTATCCATGGGTGCCGTATGCTCCTTATGTCATGAAAACACATGGTTCCCAGGTTCCATTGGTACCCATCCCTAGGTTGAAACCACATCAACCTGTATCATCCTCGAAGGTTAAGAAATCAGATAGTAAAAAGAATGAGGGTAAAACTAAGAAGGTCGCTAGTATTAGTTTGTTGGGCCTTTTAGTCTTTGTCATGTTATTTGGGGGATTAGTTCCTATTGTGGATCTTAATTTTGGGGGATTTGAGGGTGAAGGTAGGTCTATCTACATTAGTAATAGGTTTAACAGTCAGAACACAGGGAGAGTTTTGCATGTTAATGGCCAAAAAAATGGCTCGGAAGGACGGAATGGATTAGAATGTTATAATAAGAACTTTGACGTGCCGGAGAGAATAAGTTATCATAGAGGTCATACTAAGGGAGAAGAGCCTGGTTATAATAAAAAACAGCAAGGCTCATGGTCTGTACCGAGTTCAAAGGAATCTGATCATCTGGTTAACGAAATTGAGCCTCTTGTCGCTTCCTTGTATGTTCCAAGGAATGATAAGCTCGTGAAGATTGATGGAAACTTGATAATTCATTCTGTTCTAGCTAGTGAGAAAACCATGGCATCTCATAGTATTAATGAGAAGAAGAATCTTGGGGAATCTAGTGTGGCAACATATGGGGATCATGCTTCTGCTTTAGCAATCCCTGAAGTGAGAAGAAACAGTGGCACACATCCTGATATCCACAGAAGCACAGCTGAGCATCTGAAAGCTCTTGCTGCTAGCTCTGCTGAATCTATGAAGGACCAGTTCGAGTCATCTGTGAGCGATGGCACAATGCAGCAGTGGTTCCAAGAAGGACTGGCAGGACCACTGATGAGCTCTGGGGTGTGCACAGAAGTGTTTCAATTTGATGTGTTAACTACTCCTGGAGCTATAGTTCCAGTAGCTGCAGTTGCTAATTCTACTGCAGTAAATCACAAGAAAGCTTCAAATATCAATAGGAGTAGGAACAGAAGAATCCTACATGGTCTTCCAGTTTCTGTCGCTGGATCTGGCGTCAACATGACCGAAGAACATATAAGAATGAGTTCACAGGATAGCTACCATGGTAATAAATCTGTTTCTTCGATGGTAGTTTCTGTTCTTATTGATCCCAGGGAACTTGTTGATGCTGATGTCGATGGCACGATCAGAAAGAAGTCTCTTTCCAGGATTTTTGTAGTCATGCTCATAGACAGTGTTAAGTATGTGACTTACTCATGTATGCTGCCTCGCTCTGCTCCTCATCTGGTCACCACTTGA 2391 0.4446 MTVNLDMVEAETDTLVTQSPSQPFELASEFNDLSFPSMDSLFGGNVLNSSGAELGFGAFGLDGCDDLEIVLDDLDLYFPAENEQFVIPNVDGSMPSGSDQEGNPGAAHGLNSKSSCCSVSLFPESGCSGVSGDQNVDVARFLNCPPHSESDGSEREYFLPQSSASITHSTDQSSKDNKVSEGGGCNPESSDEPVSSQGSGNGGSGVYEVMNAASPDCDRDVSSTMYVDPNVKMENENISALKRKKEHAEENNNIIELRTSKYRRSSTIMESDDHDGGSVGNNEEEKRKARLMRNRESAQLSRQRKKHYVEELEDKVRSMHSTIADLNSKISFIMAENATLKQQIGGAGMCPQPTPAMYPHPPMAPLGYPWVPYAPYVMKTHGSQVPLVPIPRLKPHQPVSSSKVKKSDSKKNEGKTKKVASISLLGLLVFVMLFGGLVPIVDLNFGGFEGEGRSIYISNRFNSQNTGRVLHVNGQKNGSEGRNGLECYNKNFDVPERISYHRGHTKGEEPGYNKKQQGSWSVPSSKESDHLVNEIEPLVASLYVPRNDKLVKIDGNLIIHSVLASEKTMASHSINEKKNLGESSVATYGDHASALAIPEVRRNSGTHPDIHRSTAEHLKALAASSAESMKDQFESSVSDGTMQQWFQEGLAGPLMSSGVCTEVFQFDVLTTPGAIVPVAAVANSTAVNHKKASNINRSRNRRILHGLPVSVAGSGVNMTEEHIRMSSQDSYHGNKSVSSMVVSVLIDPRELVDADVDGTIRKKSLSRIFVVMLIDSVKYVTYSCMLPRSAPHLVTT* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00893 796 Coils Coil 309 343 - -
Pte13g00893 796 MobiDBLite consensus disorder prediction 512 526 - -
Pte13g00893 796 SUPERFAMILY Leucine zipper domain 286 344 IPR046347 GO:0003700|GO:0006355
Pte13g00893 796 MobiDBLite consensus disorder prediction 388 415 - -
Pte13g00893 796 FunFam bZIP transcription factor 49 285 347 - -
Pte13g00893 796 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 64 793 - -
Pte13g00893 796 MobiDBLite consensus disorder prediction 163 210 - -
Pte13g00893 796 Pfam bZIP transcription factor 283 344 IPR004827 GO:0003700|GO:0006355
Pte13g00893 796 Coils Coil 231 258 - -
Pte13g00893 796 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 284 344 IPR004827 GO:0003700|GO:0006355
Pte13g00893 796 MobiDBLite consensus disorder prediction 89 109 - -
Pte13g00893 796 MobiDBLite consensus disorder prediction 401 415 - -
Pte13g00893 796 MobiDBLite consensus disorder prediction 268 304 - -
Pte13g00893 796 MobiDBLite consensus disorder prediction 163 204 - -
Pte13g00893 796 Coils Coil 281 301 - -
Pte13g00893 796 CDD bZIP_HY5-like 287 338 - -
Pte13g00893 796 Gene3D - 284 346 - -
Pte13g00893 796 SMART brlzneu 282 346 IPR004827 GO:0003700|GO:0006355
Pte13g00893 796 MobiDBLite consensus disorder prediction 502 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00893 Pte-Chr13 7769109 7774347 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00893 28 797 bZIP Transcription Factor Family AT2G40950 45.605 1.16e-168 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte13g00893 bZIP_1 1.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00893 K25783 - qsa:O6P43_006328 709.909