Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00867 ATGAATTCATTCAATCTCGGCTACAGAGATGATATTAAAGTAAGACGGGATTCACTTCAAGCTGCCTTAGTTCAAACAGGTTTAGACAACCTGCCAGCATTTACTAGCAATGCCAGCTTCATCCACGACTCGCTTGCGATAAAGCCCTTGGATGCCACAGATGTGGTAGCTCTCTCAGGTGGCCATACTATTGGTGTAAGTCACTGCAGTTCTTTCACTAACAGGTTGTACCCAAAGCAAGATCCCACCATGGCCAAATACTTAGCAAAAAAACTTACAGAAATCTTCCCTGCTGAGAATAGCAATGAGACCATTGTGATGGACAGCCGGACTCCTGAATTGATTGATAACAAGTACTTCATGAACCACCAAGGGTTGTTCACTTCAGACCAAGACTTGTACTCGGACAGTAGGACCAAGGATATTGTAGAAAGCTTTGCATTGGACCAGTCACTGTTCTTTGAAAAGTTTGCCCATGCTATGATTAAGATGAGTCAGTTGAACGTGCTCACAGGAAGGAAAGGGGAAATCCGAGGTATAGCGAGTTGCTTGGACCAAACAAAAGCATACAAGATGAAAGAAGAAGAGAGTAGGATAAGAAAGGTTTGCACAAATGAGTAG 621 0.4316 MNSFNLGYRDDIKVRRDSLQAALVQTGLDNLPAFTSNASFIHDSLAIKPLDATDVVALSGGHTIGVSHCSSFTNRLYPKQDPTMAKYLAKKLTEIFPAENSNETIVMDSRTPELIDNKYFMNHQGLFTSDQDLYSDSRTKDIVESFALDQSLFFEKFAHAMIKMSQLNVLTGRKGEIRGIASCLDQTKAYKMKEEESRIRKVCTNE* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00867 206 PANTHER - 15 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte13g00867 206 Gene3D - 15 178 - -
Pte13g00867 206 SUPERFAMILY Heme-dependent peroxidases 15 180 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pte13g00867 206 ProSitePatterns Peroxidases proximal heme-ligand signature. 54 64 IPR019793 -
Pte13g00867 206 Gene3D Peroxidase, domain 2 33 165 - -
Pte13g00867 206 PRINTS Haem peroxidase superfamily signature 108 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte13g00867 206 PRINTS Haem peroxidase superfamily signature 54 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte13g00867 206 PRINTS Plant peroxidase signature 119 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte13g00867 206 PRINTS Plant peroxidase signature 53 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte13g00867 206 PRINTS Plant peroxidase signature 159 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte13g00867 206 ProSiteProfiles Plant heme peroxidase family profile. 15 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte13g00867 206 Pfam Peroxidase 15 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte13g00867 206 FunFam Peroxidase 32 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00867 Pte-Chr13 7426790 7427720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00867 15 195 Peroxidase AT1G71695 54.348 2.33e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00867 K00430 - sind:105179284 215.698