Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00832 ATGGATAGTCTTCTGAAAGATTTCGAGTTAGAGCACAAGAATCCTTCGGTGGAGGCTCTGAGGAGATGGAGATCAGCGGTTTCATTGGTGAAGAATCCACGAAGAAGGTTTCGTATGGTCGCAGATCTTGAGAAACGCTCCGAAGCTGAACAGATTAAGCTCAAAATCCAGGAAAAAATTCGGGTTGCTCTTTATGTTCAAAAGGCGGCATTGCAGTTTATTGATGCTGGTGGCAGGGCTGAGTACAAGCTGTCAGATGGAGCTAGAGAAGCAGGTTTTGGAATTGATCCTGATGAGCTTGCTTCTATTGTCCGAAGTCATGATTACAAAGGCTTGAAAATACATGGTGGGGTAGAGGGGATTTCAAGAAAACTCTCTGTCTCGCCAAATGAAGGTGTTAGTGAAACTAATATAGACTCCAGACAACATATATATGGTACCAACCGTTATACTGAGAAACCAGCCAGAAGTTTTTGGGTTTTTGTATGGGAAGCTTTGCATGACCTCACACTTGTTGTTCTCATGGTATGTGCTGTAGTTTCCATTGGCATAGGACTTGCCACTGAAGGGTGGCCAAAGGGTGTTTATGATGGTCTGGGTATCTTGCTTAGCATATTCCTGGTAGTTATTGTTACCGCTACCAGTGACTATAACCAATCATTGCAATTTAGGGATTTGGACCGAGAGAAGAAAAAAATCTTCATTCAAGTCACAAGAGATGGGAGAAGGCAGAAGCTTCCCATATATGATTTGGTAGTGGGAGACGTTGTTCATCTATCTATAGGTGATCAAGTGCCCGCTGATGGTATATATGTATCAGGATACAGCTTGGTGATCGACGAGTCAAGCTTATCAGGTGAGAGTGAGCCGGTGAATGTAAATGATGAGAGACCTTTCCTTCTTTCAGGGACTAAAGTGCAAGATGGGTCAGGTAAAATGTTGGTGACAGCTGTTGGCATGAGGACTGAGTGGGGAAAGCTGATGGAAACTCTCAACGAAGGAGGAGAGGATGAGACGCCGTTGCAAGTAAAACTGAATGGGGTTGCCACGCTTGTTGGTAAAATTGGTTTATGTTTCGCTGTACTGACATTTGTAGTATTAACAGTAAGATTTCTCGTGGAAAAAGTTCTACGTGGTGAGTTTACTCATTGGTCTTCCACGGATGCTTTGACGCTTTTAAACTATTTTGCTATTTCTGTAACTATTTTAGTAGTTGCTGTTCCGGAAGGATTACCCTTAGCAGTGACGTTAAGCCTTGCCTTTGCTATGAAAAAGCTAATGGATGACAGAGCACTTGTGAGGCATCTCTCTGCATGCGAGACCATGGGTTCTGCAACTTGCATTTGTACTGATAAGACTGGAACGTTGACGACCAACCATATGGTAGTTGATAAAATATGGATATGTGAGAGATCGTTGCAAGTAAAAGATAATAAGGAATCATTAAAATCAGAATTATCTGAAAATGCCTTGAGTATCCTTTTCCAGGCCATCTTTCAAAATACCGCATCTGAAGTGGTAACCAATAAAGATGGAAAAAGATCCATATTAGGATCTCCAACAGAATCTGCCATACTTGAATTTGGCTTAGCTTTGGGTGGTGATTTCGACTGCCAGCGTAAAGAGCTTAAATTACTAAAAGTAGAACCTTTCAACTCAGTAAAAAAGAAGATGTCCGTTCTAGTGGCTTTTCCTGATGGAAGGATACGAGCTTTCTGCAAAGGTGCATCAGAAATAGTACTTGGCATGTGTGACCGGATTATAGATAGTAGTGGCGAACCTATTGAGCTTCCTCAGGAACAGGCCAGGAATGTTACTGGTGTTATAAATGATTTCGCCTCTGAAGCTTTGAGAACAATTTGCCTGGCCTACAAGGATCTAGATGAAGCTCCTAATGAAACCAATTTACCTGATAATGGTTATACATTGGTAGCTATTGTAGGAATTAAAGACCCTGTTCGCCCTGGGGTTAAGAATGCTGTCAAGACCTGCCAAGCAGCTGGAATAACTGTCCGTATGGTCACTGGTGACAATATAAATACTGCCAAGGCAATTGCTAAAGAATGTGGTATACTCACACCAGATGGTATTGCCATAGATGGACCAGAATTTCGCAAAATGTCTCTTGAGCAGATGGAGGATGTCATTCCAAGAATCCAGGTAATGGCAAGATCTTTGCCACTTGACAAACATACGTTAGTAACCAACCTGAGGAACATGTTTGGTGAAGTTGTTGCTGTTACTGGTGATGGGACCAACGATGCCCCTGCGTTGCATGAGTCAGACATAGGTCTTGCCATGGGCATAGCAGGAACAGAGGTTGCTAAAGAAAATGCTGACGTCATTATATTGGATGACAACTTCTCAACCATTGTGAATGTGGCTAAATGGGGTCGATCAGTATATATAAACATTCAGAAGTTCGTCCAGTTTCAGTTGACAGTCAATGTTGTTGCCCTAGTAATCAATTTTATTTCTGCCTGCATCACAGGCTCTGCTCCTCTGACAGCTGTACAGTTGCTTTGGGTCAACTTGATCATGGACACCCTCGGTGCATTAGCTCTGGCCACTGAACCTCCTAGTGATGCTCTTATGGAAAGACCCCCAGTGCGGAGGGGAGTGAGCTTCATTACTAAAACCATGTGGAGAAATGTTATAGGTCAAAGCATATATCAATTGATCGTCCTTTTACTGCTCAATTTTGATGGGAAGAGGCTACTTAGACTTCGTGGTGCAGATGCAACCGATGTCCTTAACACTGTTATATTCAATTCTTTCGTATTTTGTCAGGTTTTCAATGAAATAAACAGCCGAGACATGGAAAAAATCAATGTTTTCCGTGGCATTTTCAGCAGCTGGATATTTTTGAGCATTGTCTTCTTCACAGTGGTATTCCAAGTGATCATCGTGGAATTCCTCGGTGCATTTGCCAGCACTGTGCCACTCAGCTGGGAGTTTTGGTTAATCAGTGTCTTACTTGGAGCTGTTAGCTTGATTGTGGCGGTTATCATTAAGTGCATTCCTGTTGATAAAGATAGAACACCAAAGCACCATGATGGTTATGCGCAACTCCCATCAGGCCCTGAACTTGCATAA 3096 0.4254 MDSLLKDFELEHKNPSVEALRRWRSAVSLVKNPRRRFRMVADLEKRSEAEQIKLKIQEKIRVALYVQKAALQFIDAGGRAEYKLSDGAREAGFGIDPDELASIVRSHDYKGLKIHGGVEGISRKLSVSPNEGVSETNIDSRQHIYGTNRYTEKPARSFWVFVWEALHDLTLVVLMVCAVVSIGIGLATEGWPKGVYDGLGILLSIFLVVIVTATSDYNQSLQFRDLDREKKKIFIQVTRDGRRQKLPIYDLVVGDVVHLSIGDQVPADGIYVSGYSLVIDESSLSGESEPVNVNDERPFLLSGTKVQDGSGKMLVTAVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATLVGKIGLCFAVLTFVVLTVRFLVEKVLRGEFTHWSSTDALTLLNYFAISVTILVVAVPEGLPLAVTLSLAFAMKKLMDDRALVRHLSACETMGSATCICTDKTGTLTTNHMVVDKIWICERSLQVKDNKESLKSELSENALSILFQAIFQNTASEVVTNKDGKRSILGSPTESAILEFGLALGGDFDCQRKELKLLKVEPFNSVKKKMSVLVAFPDGRIRAFCKGASEIVLGMCDRIIDSSGEPIELPQEQARNVTGVINDFASEALRTICLAYKDLDEAPNETNLPDNGYTLVAIVGIKDPVRPGVKNAVKTCQAAGITVRMVTGDNINTAKAIAKECGILTPDGIAIDGPEFRKMSLEQMEDVIPRIQVMARSLPLDKHTLVTNLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIILDDNFSTIVNVAKWGRSVYINIQKFVQFQLTVNVVALVINFISACITGSAPLTAVQLLWVNLIMDTLGALALATEPPSDALMERPPVRRGVSFITKTMWRNVIGQSIYQLIVLLLLNFDGKRLLRLRGADATDVLNTVIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWIFLSIVFFTVVFQVIIVEFLGAFASTVPLSWEFWLISVLLGAVSLIVAVIIKCIPVDKDRTPKHHDGYAQLPSGPELA* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00832 1031 NCBIfam HAD-IC family P-type ATPase 544 692 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte13g00832 1031 NCBIfam HAD-IC family P-type ATPase 201 473 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte13g00832 1031 NCBIfam HAD-IC family P-type ATPase 718 836 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte13g00832 1031 FunFam Calcium-transporting ATPase 15 75 - -
Pte13g00832 1031 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Pte13g00832 1031 PRINTS P-type cation-transporting ATPase superfamily signature 772 784 - -
Pte13g00832 1031 PRINTS P-type cation-transporting ATPase superfamily signature 667 677 - -
Pte13g00832 1031 PRINTS P-type cation-transporting ATPase superfamily signature 645 656 - -
Pte13g00832 1031 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Pte13g00832 1031 PRINTS P-type cation-transporting ATPase superfamily signature 748 767 - -
Pte13g00832 1031 Gene3D - 15 76 - -
Pte13g00832 1031 NCBIfam calcium-translocating P-type ATPase, PMCA-type 112 1009 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pte13g00832 1031 SUPERFAMILY Calcium ATPase, transduction domain A 234 330 IPR008250 -
Pte13g00832 1031 PRINTS H+-transporting ATPase (proton pump) signature 748 764 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte13g00832 1031 PRINTS H+-transporting ATPase (proton pump) signature 780 805 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte13g00832 1031 PRINTS H+-transporting ATPase (proton pump) signature 605 623 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte13g00832 1031 FunFam Calcium-transporting ATPase 645 793 - -
Pte13g00832 1031 Pfam E1-E2 ATPase 235 427 - -
Pte13g00832 1031 PANTHER CATION TRANSPORTING ATPASE 83 1009 - -
Pte13g00832 1031 Pfam Cation transporter/ATPase, N-terminus 116 181 IPR004014 -
Pte13g00832 1031 Gene3D - 132 332 - -
Pte13g00832 1031 FunFam Calcium-transporting ATPase 459 652 - -
Pte13g00832 1031 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1009 IPR023298 -
Pte13g00832 1031 SMART Cation_ATPase_N_a_2 108 186 IPR004014 -
Pte13g00832 1031 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Pte13g00832 1031 Pfam Cation transporting ATPase, C-terminus 833 1006 IPR006068 -
Pte13g00832 1031 SFLD C1.7: P-type atpase like 431 800 - -
Pte13g00832 1031 SUPERFAMILY HAD-like 448 853 IPR036412 -
Pte13g00832 1031 FunFam Calcium-transporting ATPase 213 332 - -
Pte13g00832 1031 FunFam Calcium-transporting ATPase 765 1011 - -
Pte13g00832 1031 Pfam haloacid dehalogenase-like hydrolase 447 761 - -
Pte13g00832 1031 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Pte13g00832 1031 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 455 657 IPR023299 GO:0000166
Pte13g00832 1031 CDD P-type_ATPase_Ca_PMCA-like 138 881 - -
Pte13g00832 1031 Gene3D - 164 1007 - -
Pte13g00832 1031 Gene3D - 446 793 IPR023214 -
Pte13g00832 1031 SFLD p-type atpase 431 800 IPR044492 -
Pte13g00832 1031 Gene3D - 459 652 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00832 Pte-Chr13 7038353 7046273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00832 56 1028 Primary Pumps ATPases AT3G57330 74.025 0.0 1491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00832 K01537 - qsa:O6P43_006482 1679.07