Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00822 ATGGGAACTACAGGGAGACAGTTGAAAGCTATGCTTAGGAAGAATTGGCTTCTGAAAATTCGCCATCCTTTCGCTACTTGTTGCGAGATTTTGCTCCCTACAGTTGTAATGATATTGCTAATAATTGTAAGGACTAGGGTCGATACCCGGATTCATCCTGCACAATCGTACATTAGAAAAGATATGTTTGTAGAAGTGGGCAGGGGTAAATCCCCAAATTTCCAACAAGTTCTGGAACTATTGTTGTCTAAGGGGGAGTCCCTAGCGCTTGCACCGGATACTAAAGAAACAAGGATGATGGTTGACTTAATGTCGATAAAATTTCCACTGTTGAAGCTTGTCACTAGAATATATAAAGATGAGCTTGAGCTAGAAACCTATATACGTTCAGATGTCTATGGGTTCTGCAAAGAGAAATGGAATTGCTCAAATTCCAAGATTAAAGGAGCTGTTGTATTTCATGAACAAGGTCCTCAGCAATTTGATTATAGCATACGCCTCAATCATACATGGGCTTTCTCTGGTTTTCCTGATATTAAATCCATAATGGACGTGAATGGTCCTTTTCTCAACGACTTGGAATTGGGTGTGAACATCGTACCAACTATGCAGTACAGCTTCAGTGGATTTTTGACGCTTCAGCAAGTGATTGATTCTTTCATAATCTTGAGTGCCCAGCAGAGTCAAACTACTGCCGAAGATGAAAAGATGGGAGTTTATGCTACACATTTCCCTGATGATAGTTTCTCTCCAAAAATGCCGCTGACACAATTCAATCCTGCTCATATAAGAATTGCTCCATTTCCCACTCGTCAATACACAGATGATGAGTTCCAATCAATTGTGAAGAGAGTGATGGGTATATTATATCTGTTGGGGTTTCTCTACCCAATCTCTAGCCTGATCAGTTATTCCGTGTTTGAGAAGGAACAGAAGATAAAAGAAGGCCTTTACATGATGGGCCTGAAAGATGGTGTATTCTATTTGTCTTGGTTTATCACATATCTTATTCAGTTTGCACTTTCTTCTTTGATCATTACAGCTTGCACCATGGATAATCTGTTCAAGTATAGTGACAAGACAGTGGTGTTTGTATACTTTTTCTTCTTTGGATTAAGTGCAATCATGCTATCGTTTTTGCTGTCTACATTTTTCACACGGGCCAAAACAGCTGTGGCAGTTGGGACACTTTGTTTTCTGGGAGCCTTTTTTCCATATTACACTGTTTATGATGAGGCTACCCCTACGATAATAAAGGTTATTGCTTCATTGCTTTCACCTACGGCATTTGCTTTGGGGTCAATCAACTTTGCTGACTACGAACGTGCTCATGTTGGATTACGTTGGAGTAACATCTGGCGTCCATCATCTGGAGTGAATTTTATAGCTTGTCTTCTGATGATGCTGTTTGACTCTCTGCTATATTGTCTAATCGGTCTTTACTTGGATAAGGCACTTCCAAGGGAGTATGGATTGCGTCATCCTTGGGCTTTTATATTCCAGTGTTGCTTCTGGAGAAAGAAAACTACCACAAAAAATAACTCTTCTAGTTCAAAATGTGAAATTATTAACGAGTTACCAAAGTCTAGTGGAAGCTTTTCAGGAACAAATGTCAGCAGTTCTGCTTTTGAGGCAATAAGCTTGGACATGAAACAACAGGAGCTTGATGGCAGATGCTTTCAAATAAGGAACTTGCACAAAGTGTATGCCAGTAAGAAGGGAGAATGTTGTGCAGTTGACTCATTGCAGCTCACACTGTATGAAAATCAGATTCTCGCACTTTTAGGGCACAACGGAGCTGGAAAAAGCACGACAATATCAATGCTTGTTGGTCTTATTCCTCCCACTTCAGGGGATGCTTTGGTGTTTGGAAAGAACATTAACAAAGATATGGACGAGATACGCAGGATGTTGGGTGTGTGCCCACAGAATGATATCCTTTTTCCAGAGTTGACAGTCAGAGAACACCTTGAAATTTTTGCCACATTGAAAGGTGTGGAAGAAGACTCTTTGGAGAATGTTGTTACTGACATGGTTAATGAAGTGGGGTTGGCTGATAAACTAAACACAGTTGTGGAGGCCCTATCTGGTGGCATGAAGCGGAAATTATCTCTTGGAATTGCTTTAATTGGGAACAGTAAGGTTGTGATTCTTGATGAACCTACTAGTGGCATGGATCCATATTCAATGAGACTGACTTGGCAGTTGATAAAGAGAATAAAAAAGGGTAGGATAATATTACTGACAACACACTCGATGGATGAAGCTGACGAATTAGGTGATCGGATAGCTATCATGGCCAATGGTTCACTGAAATGCTGCGGAAGCTCCCTTTTCTTGAAGCGCCAGTTTGGGGTTGGTTATACTCTGACTCTTGTCAAGTCAGCACCAACCACATCTGTAGCTGCTGATATAGTCTTCCGTCATGTTCCATCTGCAACTTGTGTGAGTGAGGTTGGAACTGAGATTTCCTTCAAGCTTCCACTGGCATCGTCCTCTTCATTTGAAAGTATGTTCAGAGAAATTGAAAGTTACACAAAAAAGTCAGTTTGTGACTCAGAAAAAAGTGCTGGTGGGGATATAGACTGCCTAGGTATTGAAAGCTATGGTATTTCTGTCACAACTCTGGAGGAGGTATTCCTCAAAGTTGCACAATGTGACTATGATGAAGTTGAAAGTGTGGACCCACAAAATAGCTTCCTTTTACCACCAGATTCTGCAATTTGTCAAGAAGCTTTTAATGGTCAACCCAAGAAATTTCGGCACCTGAAACTTTGGGGAAACCATAGGGAGGTCCTTGGTTGCATGTATACAATTGTGGAAAAGGGGATGAGTTTGATCCTTGCTGCAGTTTTAAGTTTTATAAGCTTCTTGGGTATGCATTGTTGTAGCTGTTGTGGCATCACGGAATCAACATTCTGGAAACATTCTAAAGCGTTATTCATTAAGAGGGCAATATCAGCACGGAGAGATGGCAGAACAGTTGTTTTCCAGCTTCTAATTCCTGCCGTCTTCTTGCTCATTGGTCTTCTATTTCTAACTCTGAAGGCACATCCCGATCAGCAATCTGTGACCTTTACGACTTCATATTTCAATCCTCTTTTAAGTGGTGAAGGAGGGGGTGGGCCAATACCTTTTGATCTATCATTACCTATTGCTCAAAAGGTTGCACAGTATGTTGAAGGGGGTTGGATCCAACGGTTTGGACCAAGTGGATATAGATTTCCTGATCCTGAAAAGGCATTACACGATGCTATCGAGGCAGCAGGGCCAACTTTGGGGAGAAAGCTAGTTTTAATGAGTGAATATCTTATGTCTAGCTTTAACGAAACTTACGAGTCAAGATATGGGGCTATTGTGATGGATGATCAGTACGGTGATGGAAGCTTAGGATACACCGTGCTACATAACTGTTCTTGTCAGCATGCTGGTCCAACTTTCATCAACTTGATGAATGCTGCAATACTAAGGCTTGCAACTGGTGACAAAAATATGACAATCAAGACTCGTAACCATCCTCTACCAATGACACAAAGCCAGCATTTACAACGCCATGACCTGGATGCCTTCTCTGCTGCCATTATTATCAATATTGCCTTCTCTTTCATTCCTGCCTCCTTTGCTGTTCCAATTGTTAAGGAACGTGAGGTAAAAGCTAAACACCAGCAGCTTATCAGTGGAGTTTCAGTCCTATCGTATTGGACTTCAACATATATATGGGACTTTGTCAGCTTCTTGTTTCCAGCATCTATTGCAATCATCCTCTTTTATATATTTGGGCTGGATCAATTTGTGGGAACTGGGTCTTTGATTCCTACAATGATCATGTTTTTGGAGTACGGATTGGCAATTGCATCCTCTACATATTGCCTCACCTTTTTCTTTTACGATCACACCATGGCTCAGAATGTTATTCTCCTGGTCCACTTTTTCACTGGACTCATTCTAATGGTCATCTCATTTATAATGGGCATCATTCAGACAACGGCAAGTGCTAATTCTCTTCTGAAGGTGTTTTTCAGAATTTCTCCTGGATTTTGCTTTGCTGATGGACTTGCATCATTGGCTCTTCTGCGGCAAGGGATGAAAGATAAAACAAGTCAGCATGTTTTTGATTGGAATGTTACTGGTGCTTCCATTTGCTATCTTGCTGTTGAGAGCATTATTTACTTTCTTTTAACACTTGGTCTGGAACTTCTGCCGTTGCGTAAATTGACTTGGAAAACAATCAAGGGGCAATGGAAGAGTGTTAGACATTCTTTATGTGGAACATCAGATTACCTGGAGCCCCTCCTAAGTCATTCTTGCAAAACCGATATTCTTGATGAAGATGCAGATGTAAAGGCCGAAAGAGATAGAGTACTTTCAGGTTCCATTGGTAATGGCATTATCTACTTACAAAATCTCCGGAAGGTGTATGGAGGAGGAAAGCATCAAGGTGAAAAGGTTGCTGTGGATTCATTGACATTTGCAGTTCAGGAAGGAGAATGTTTTGGATTTTTAGGGACAAATGGAGCTGGAAAGACCACAACCTTATCTATGCTATCAGGAGAGGAGACTCCTTCTGATGGAACTGCATTCATTTTTGACAAAGACATTCGTGCCAATCCCAAAGCAGCTAGGCGACATATTGGATACTGTCCACAATTCGACGCTTTATTAGAGCATTTAACTGTTCAAGAACATCTTGAGCTTTATGCAAGAATAAAGGGAGTTCCAGAGTACATGATTAGCAATGTTGTTATGGAAAAGTTACTGCAGTTTGACTTGTTGAAGCATGCTTACAAACCATCGTTTACCCTCAGTGGAGGGAATAAGCGGAAATTATCCGTTGCAATTGCAATGATAGGAGATCCTCCTATAGTCATTTTAGACGAGCCATCAACTGGTATGGATCCTATTGCTAAACGGTTTATGTGGGAGGTCATATCTCGACTGTCCACCAGACAAGGAAAGACAGCAGTAATTCTTACTACCCACAGTATGAATGAAGCACAAGCCTTATGTACCCGTATTGGGATAATGGTCGGAGGACGGCTAAGATGCATTGGAAGTCCTCAGTATCTGAAAACCAGATATGGGAATCACCTAGAATTAGAGATAAAACCCACTGACGTGAGTTCCACTGAACTGGAAAGCCTCTGCCTGGTTATTCAGAACTGTCTGTTTGACATTCCATCTCAACGCAGAAGCTTGCTAAATGACCTTGAGATATGCATCGGAGGCTCAGACTCCACAATATCAGAGAGCACCTCCGTTTCAAAAATTAGCTTGTCTCGAGAAATGATAACTAAAGTTGGACGCTGGCTTGGAAATGAGGAAAGGACAAAGGCACTTGTCTCTTCCACGATTGCCTGTGATGGGGTTCTCGGTGAACAGTTATCAGAGCAATTTATTAGAGATGGAGGAATTCCATTGCCAGTATTTTCTGAATGGTGGTTGTCAAAAGAAAAATTTTCAGCCATTGATTCATTTGTCCTATCTTCATTTCGAGGGTCACGATGCCAAGGATGCAATGGGTTGAGTGTCAGATACCAGTTGCCATGTGGTGACGGTCAATCGCTGGCAGATGTTTTTGGGCTCATAGAAGGAAACAAAAATCGGTTGGCCATTGCTGAATATAGCATCAGCCAGTCTACTCTGGAGACCATATTTAATCATCTTGCGGCTACGTCATGA 5679 0.4138 MGTTGRQLKAMLRKNWLLKIRHPFATCCEILLPTVVMILLIIVRTRVDTRIHPAQSYIRKDMFVEVGRGKSPNFQQVLELLLSKGESLALAPDTKETRMMVDLMSIKFPLLKLVTRIYKDELELETYIRSDVYGFCKEKWNCSNSKIKGAVVFHEQGPQQFDYSIRLNHTWAFSGFPDIKSIMDVNGPFLNDLELGVNIVPTMQYSFSGFLTLQQVIDSFIILSAQQSQTTAEDEKMGVYATHFPDDSFSPKMPLTQFNPAHIRIAPFPTRQYTDDEFQSIVKRVMGILYLLGFLYPISSLISYSVFEKEQKIKEGLYMMGLKDGVFYLSWFITYLIQFALSSLIITACTMDNLFKYSDKTVVFVYFFFFGLSAIMLSFLLSTFFTRAKTAVAVGTLCFLGAFFPYYTVYDEATPTIIKVIASLLSPTAFALGSINFADYERAHVGLRWSNIWRPSSGVNFIACLLMMLFDSLLYCLIGLYLDKALPREYGLRHPWAFIFQCCFWRKKTTTKNNSSSSKCEIINELPKSSGSFSGTNVSSSAFEAISLDMKQQELDGRCFQIRNLHKVYASKKGECCAVDSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTSGDALVFGKNINKDMDEIRRMLGVCPQNDILFPELTVREHLEIFATLKGVEEDSLENVVTDMVNEVGLADKLNTVVEALSGGMKRKLSLGIALIGNSKVVILDEPTSGMDPYSMRLTWQLIKRIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKRQFGVGYTLTLVKSAPTTSVAADIVFRHVPSATCVSEVGTEISFKLPLASSSSFESMFREIESYTKKSVCDSEKSAGGDIDCLGIESYGISVTTLEEVFLKVAQCDYDEVESVDPQNSFLLPPDSAICQEAFNGQPKKFRHLKLWGNHREVLGCMYTIVEKGMSLILAAVLSFISFLGMHCCSCCGITESTFWKHSKALFIKRAISARRDGRTVVFQLLIPAVFLLIGLLFLTLKAHPDQQSVTFTTSYFNPLLSGEGGGGPIPFDLSLPIAQKVAQYVEGGWIQRFGPSGYRFPDPEKALHDAIEAAGPTLGRKLVLMSEYLMSSFNETYESRYGAIVMDDQYGDGSLGYTVLHNCSCQHAGPTFINLMNAAILRLATGDKNMTIKTRNHPLPMTQSQHLQRHDLDAFSAAIIINIAFSFIPASFAVPIVKEREVKAKHQQLISGVSVLSYWTSTYIWDFVSFLFPASIAIILFYIFGLDQFVGTGSLIPTMIMFLEYGLAIASSTYCLTFFFYDHTMAQNVILLVHFFTGLILMVISFIMGIIQTTASANSLLKVFFRISPGFCFADGLASLALLRQGMKDKTSQHVFDWNVTGASICYLAVESIIYFLLTLGLELLPLRKLTWKTIKGQWKSVRHSLCGTSDYLEPLLSHSCKTDILDEDADVKAERDRVLSGSIGNGIIYLQNLRKVYGGGKHQGEKVAVDSLTFAVQEGECFGFLGTNGAGKTTTLSMLSGEETPSDGTAFIFDKDIRANPKAARRHIGYCPQFDALLEHLTVQEHLELYARIKGVPEYMISNVVMEKLLQFDLLKHAYKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQYLKTRYGNHLELEIKPTDVSSTELESLCLVIQNCLFDIPSQRRSLLNDLEICIGGSDSTISESTSVSKISLSREMITKVGRWLGNEERTKALVSSTIACDGVLGEQLSEQFIRDGGIPLPVFSEWWLSKEKFSAIDSFVLSSFRGSRCQGCNGLSVRYQLPCGDGQSLADVFGLIEGNKNRLAIAEYSISQSTLETIFNHLAATS* 1893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00822 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Pte13g00822 1892 CDD ABC_subfamily_A 1464 1690 - -
Pte13g00822 1892 SMART AAA_5 1494 1681 IPR003593 GO:0016887
Pte13g00822 1892 SMART AAA_5 588 770 IPR003593 GO:0016887
Pte13g00822 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1458 1696 IPR027417 -
Pte13g00822 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1464 1702 IPR003439 GO:0005524
Pte13g00822 1892 FunFam ATP-binding cassette sub-family A member 12 552 797 - -
Pte13g00822 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1113 1398 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pte13g00822 1892 Pfam ABC transporter 1486 1628 IPR003439 GO:0005524
Pte13g00822 1892 Gene3D - 547 796 IPR027417 -
Pte13g00822 1892 Gene3D - 1456 1705 IPR027417 -
Pte13g00822 1892 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Pte13g00822 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 559 798 IPR027417 -
Pte13g00822 1892 ProSitePatterns ABC transporters family signature. 1601 1615 IPR017871 GO:0005524|GO:0016887
Pte13g00822 1892 FunFam ATP binding cassette subfamily A member 5 1458 1713 - -
Pte13g00822 1892 Pfam ABC-2 family transporter protein 994 1395 IPR013525 GO:0016020|GO:0140359
Pte13g00822 1892 Pfam ABC-2 family transporter protein 182 473 IPR013525 GO:0016020|GO:0140359
Pte13g00822 1892 CDD ABC_subfamily_A 561 781 - -
Pte13g00822 1892 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00822 Pte-Chr13 6948516 6976166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00822 561 796 Calmodulin-binding Proteins AT2G36910 25.820 2.61e-15 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00822 K05643 - gmx:100803263 2845.84