Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00821 ATGGCTTCTTCTTCCTCTGGTCCGGGTTTGAAATCCGAAGTTGGTTGTGGTAGCAGCAGTGGTGGCGGTGGAGAAGCCTCTGAGGCAGTTATTGCCAACGATCAGCTCCTACTGTACAGAGGCTTGAAGAAAGCTAAGAAAGAGAGAGGGTGTACGGCCAAAGAGCGTATCAGTAAAATGCCTCCTTGTGCTGCTGGTAAACGCAGTTCCATTTACCGTGGTGTTACCAGGCATAGATGGACCGGTCGTTATGAAGCTCACCTTTGGGATAAGAGTACGTGGAACCAGAACCAGAATAAGAAGGGCAAGCAAGTTTACTTGGGTGCTTATGATGATGAAGAGGCTGCAGCCAGAGCATATGATCTTGCTGCCCTAAAATACTGGGGTCCAGGGACTCTAATCAATTTTACAGTTACAGATTATACCCGAGATCTTGAAGAGATGCAGAATATCTCCAGGGAGGATTACCTTGCAACTTTACGAAGGAAGAGCAGTGGTTTCTCCAGAGGAATCTCAAAATATCGTGGGCTCTCTAGTGGCCGCTGGGAGCCGTCTTTCAGTGGTATGGCTGGCTCTGAGTACTTCAATAGTATGTATTATGCTGATGATTCAGCAGCTGAAAGTGAGTATGCAGGTGCTTTTTGCATGGATAGAAAGACAGATTTAACAAGTTACATTAAGTGGTGGGGATCTGGTAAAAGTCGTGTACCTGAAGCTGGGATAAAATTCACGGAAGAGAAAAGACAGGGCGATGCTGTCAATGAACTTAAAACATTGGAGCAGAAAGTGCAGCATACAGAACCATACCAGATGCCACATTTAGGTGTACAACGTGATGGTAGAAAACATAGAGGCTCTAACGTCTCAGCCTTGAGTATCCTGTCACGATCAGCTGCCTATAAGAGCTTGCAAGAGAAGGCAACAAAAACTCAAGAAACCAGTGGTGATAATAACGAGAATGAAAACAAGCACACAGTTAACAAGTTGGATCATGGAAAGGCAGTTGAGAAATCCACGAATCATGAAGCAGGCAATGAGAAACTTGAAGTTGCCTTAGGGATGAGCGAAGCATTATCTCTTCAAAGAAATGTGTACCCATTAACTCCTTTGTTATCCGCTCCGCTAATGACGAATTACTGTGCTGTTGATCCCATGGTAGATCCTGTTCTATGGACATCTCTAGTTTCAGTTATTCCTTCGGGCATTTCTCGGACAGCTGAGGTTACAAAGACTGAGGCAAGTACAACTTATACAGTCTTTCCACCGGAGAAGTGA 1275 0.4494 MASSSSGPGLKSEVGCGSSSGGGGEASEAVIANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFTVTDYTRDLEEMQNISREDYLATLRRKSSGFSRGISKYRGLSSGRWEPSFSGMAGSEYFNSMYYADDSAAESEYAGAFCMDRKTDLTSYIKWWGSGKSRVPEAGIKFTEEKRQGDAVNELKTLEQKVQHTEPYQMPHLGVQRDGRKHRGSNVSALSILSRSAAYKSLQEKATKTQETSGDNNENENKHTVNKLDHGKAVEKSTNHEAGNEKLEVALGMSEALSLQRNVYPLTPLLSAPLMTNYCAVDPMVDPVLWTSLVSVIPSGISRTAEVTKTEASTTYTVFPPEK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00821 424 MobiDBLite consensus disorder prediction 302 329 - -
Pte13g00821 424 Pfam AP2 domain 71 129 IPR001471 GO:0003700|GO:0006355
Pte13g00821 424 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 34 308 - -
Pte13g00821 424 Gene3D AP2/ERF domain 71 139 IPR036955 GO:0003700|GO:0006355
Pte13g00821 424 SMART rav1_2 71 143 IPR001471 GO:0003700|GO:0006355
Pte13g00821 424 MobiDBLite consensus disorder prediction 1 25 - -
Pte13g00821 424 FunFam AP2-like ethylene-responsive transcription factor 70 139 - -
Pte13g00821 424 ProSiteProfiles AP2/ERF domain profile. 71 137 IPR001471 GO:0003700|GO:0006355
Pte13g00821 424 SUPERFAMILY DNA-binding domain 70 138 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00821 Pte-Chr13 6887336 6890717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00821 30 408 AP2-EREBP Transcription Factor Family AT2G41710 64.691 9.53e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte13g00821 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00821 K09285 - qsa:O6P43_010133 652.899