Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g00807 | ATGGGTACTCCGGCGTTCCCCAATCTTGGCAAGCATTGTTCTGTTGAAGATTGCAGGCAGATTGACTTCTTACCCTTCACATGCGATCGCTGCGACCAGGTCTTCTGTTTAGAGCATCGTAGCTACATAAAGCACCACTGTCCAAGGGCTGATAAGCAGGATGTCACTGTTGTCATCTGTCCTCTTTGCGCCAAAGGAGTTCGCCTGATTCCTGATGAAGATCCAAATATATCTTGGGAGAATCATGTGAACACTGACTGTGACCCGTCAAATTACGAGAGAGTTGTAAAGAAGAAAAAGTGCCCTGTCCCTGGGTGCAGAGAGCTTTTAACATTCTCAAACACAATCAAGTGCAAGGACTGCATGATAGATCATTGTTTGAAGCACCGGTTTGGTCCAGATCACAAACGTCCTGGACCAAGAAAACCTGAAGTTGGCTTTCCATTTATGGGTCTCTTGAGCAAGAGTAGGACAGATCCTCCGAGACCCAACCATGTTGCAACCTCATCTTCATCTAAATGGGCCTCAAGTTTCCTTACTATGGCTTCAAATGTTAAAGCATCTGCTGAAGCTGGCATAACAAAATTGAGTGGTGAATTCAGTCAAGCATGGGGTGGTGCTAGGGATGGAGTGCGACAGAGCAGCATTAGCAGTGGAAATAGTCAGGTGGAGGTGTGCCCTCAGTGTGGTGCTAAGTTTTCCTCCATTACTACTCTGGTGGATCATGTACAGAAAGTGCATGAGAAGAGTAGCAGCCGTTCAGGGGTGAGAAAAGTCACTATTGATGTTTGTCCCAAATGTAACAGAGGCTTCCGAGATCCAGTGTCTCTTGTGGAGCATGTTGAGAGGGATCATGGGGGAACTTCGAGAGCATAG | 876 | 0.468 | MGTPAFPNLGKHCSVEDCRQIDFLPFTCDRCDQVFCLEHRSYIKHHCPRADKQDVTVVICPLCAKGVRLIPDEDPNISWENHVNTDCDPSNYERVVKKKKCPVPGCRELLTFSNTIKCKDCMIDHCLKHRFGPDHKRPGPRKPEVGFPFMGLLSKSRTDPPRPNHVATSSSSKWASSFLTMASNVKASAEAGITKLSGEFSQAWGGARDGVRQSSISSGNSQVEVCPQCGAKFSSITTLVDHVQKVHEKSSSRSGVRKVTIDVCPKCNRGFRDPVSLVEHVERDHGGTSRA* | 292 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g00807 | 291 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 264 | 285 | IPR013087 | - | |
Pte13g00807 | 291 | Gene3D | - | 80 | 146 | IPR035896 | - | |
Pte13g00807 | 291 | FunFam | AN1-type zinc finger protein 2B isoform X1 | 3 | 64 | - | - | |
Pte13g00807 | 291 | ProSiteProfiles | Zinc finger AN1-type profile. | 95 | 145 | IPR000058 | GO:0008270 | |
Pte13g00807 | 291 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 262 | 290 | IPR013087 | - | |
Pte13g00807 | 291 | Pfam | Zinc finger, C2H2 type | 263 | 285 | IPR013087 | - | |
Pte13g00807 | 291 | Gene3D | Classic Zinc Finger | 207 | 290 | - | - | |
Pte13g00807 | 291 | SMART | AN1_Zf_4 | 13 | 52 | IPR000058 | GO:0008270 | |
Pte13g00807 | 291 | SMART | AN1_Zf_4 | 101 | 142 | IPR000058 | GO:0008270 | |
Pte13g00807 | 291 | SMART | c2h2final6 | 224 | 247 | IPR013087 | - | |
Pte13g00807 | 291 | SMART | c2h2final6 | 262 | 285 | IPR013087 | - | |
Pte13g00807 | 291 | Gene3D | - | 3 | 59 | IPR035896 | - | |
Pte13g00807 | 291 | ProSiteProfiles | Zinc finger AN1-type profile. | 7 | 55 | IPR000058 | GO:0008270 | |
Pte13g00807 | 291 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 224 | 252 | IPR013087 | - | |
Pte13g00807 | 291 | Pfam | AN1-like Zinc finger | 13 | 51 | IPR000058 | GO:0008270 | |
Pte13g00807 | 291 | SUPERFAMILY | AN1-like Zinc finger | 93 | 136 | IPR035896 | - | |
Pte13g00807 | 291 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 226 | 247 | IPR013087 | - | |
Pte13g00807 | 291 | SUPERFAMILY | AN1-like Zinc finger | 7 | 50 | IPR035896 | - | |
Pte13g00807 | 291 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 5 | 250 | - | - | |
Pte13g00807 | 291 | Pfam | C2H2-type zinc finger | 226 | 247 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g00807 | Pte-Chr13 | 6704493 | 6706199 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g00807 | 1 | 292 | C2H2 Transcription Factor Family | AT2G41835 | 64.189 | 5.21e-128 | 363 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pte13g00807 | zf-AN1 | 2e-13 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g00807 | - | - | vvi:100255506 | 492.271 |