Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00802 ATGGGTAATTGTTGCGTGAAACCATCGGTAAAAGGTGAGAAGAAAAGGGGTAAGAAGAAGCCAAACCCGTTTTCATTTAACTATTCTAGTTTCCAAGTAAATGGCGGCAACAAGCTTGTTGTCTTGAAGGAGGCAACAGGGCGTGAAATTGAGCTGAGATATGAACTGGGTAACGAGCTCGGCAGAGGAGAATTTGGGGTTACCTATCTGTGTACAGATAAAGATACAGGTGATAAGTTTGCCTGCAAATCAATATCAAAGAAGAAGCTTAGGACGGCTGTGGATATTGAGGATGTCAGGAGAGAGGTGGAGATCATGAAGCATTTGCCTAAACATCCAAATATTGTGAGCCTGAAGGACACGTACGAGGATGACAATGCGGTTCATCTTGTGATGGAATTGTGTGAGGGTGGAGAATTGTTTGATCGGATCGTGGCACGTGGGCACTATACTGAGCGTGCTGCTGCTGCAGTTACAAAGACGATTGTGGAAGTTGTTCAGATATGCCACAAGCATGGGGTGATGCATCGGGATCTTAAACCGGAGAACTTTTTGTTTGGAAACAAGAAGGAAACAGCTCCTTTGAAGGCAATAGATTTTGGGTTGTCTGTTTTCTTCAGACCAGGCGAAAGATTCAACGAGATTGTGGGGAGTCCATATTACATGGCTCCTGAAGTCCTTAAACGGAACTACGGCTCTGAAGTAGATATTTGGAGTGCTGGCGTTATTCTCTACATCCTGCTTTGTGGTGTCCCACCCTTTTGGGCAGAAACTGAACAAGGAGTTGCGCAGTCAATTATACGGTCTGTTCTTGATTTTAAAAGAGATCCATGGCCAAAGGTGTCTGATAATGCCAAAGACCTTGTGAAGAAGATGCTTGATCCTGATCCCAAGAGGAGGTTAACTGCTCAAGAAGTGCTAGATCATCCTTGGTTACAAAATGCAAAGAAGGCTCCAAATGTTTCATTAGGTGAAACTGTCAGAGCGAGGCTAAAGCAGTTCTCTGTGATGAACAAGCTCAAGAAAAGAGCACTAAGGGTGATTGCAGAGCACTTATCAGTAGAAGAGGTTGCTGGAATTAAGGAAGGATTCAGGATTATGGACACTGGTAATAAAGGCAGGATTGACATTGATGAGTTAAGAATAGGACTGCAAAAGCTAGGCCATCAGATTGCCGATGGAGACATCCAAATTATGATGGAAGCAGGTGATGTAGACAACGATGGATATTTGGACTATGGTGAATTTGTAGCAATTTCTGTTCATCTTAGAAGGATGGGCAACGATGAGCATTTACACAAAGCCTTTCGATTCTTTGATCAAAATCAAAGCGGATACATAGAGATTGGGGAACTCCGGGATGCCTTAGCTGATGAAATGGATACAGAGAATGAAGACGTTATAAATGCTATAATGAATGATGTGGACACAGACAAGGATGGACGAATTAGTTATGACGAATTTGCGACAATGATGAAGGCTGGCACAGATTGGAGAAAAGCTTCAAGGCAGTACTCACGTGAGCGGTTTGCAAATCTCAGTCTCAAATTGATGAGGGATGGATCAGTTGATTCTAATAAATAA 1584 0.4293 MGNCCVKPSVKGEKKRGKKKPNPFSFNYSSFQVNGGNKLVVLKEATGREIELRYELGNELGRGEFGVTYLCTDKDTGDKFACKSISKKKLRTAVDIEDVRREVEIMKHLPKHPNIVSLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQICHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVFFRPGERFNEIVGSPYYMAPEVLKRNYGSEVDIWSAGVILYILLCGVPPFWAETEQGVAQSIIRSVLDFKRDPWPKVSDNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEGFRIMDTGNKGRIDIDELRIGLQKLGHQIADGDIQIMMEAGDVDNDGYLDYGEFVAISVHLRRMGNDEHLHKAFRFFDQNQSGYIEIGELRDALADEMDTENEDVINAIMNDVDTDKDGRISYDEFATMMKAGTDWRKASRQYSRERFANLSLKLMRDGSVDSNK* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00802 527 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Pte13g00802 527 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 488 - -
Pte13g00802 527 FunFam Calcium-dependent protein kinase 7 321 496 - -
Pte13g00802 527 FunFam Calcium-dependent protein kinase 1 56 139 - -
Pte13g00802 527 Pfam EF-hand domain pair 372 421 IPR002048 GO:0005509
Pte13g00802 527 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Pte13g00802 527 Gene3D Phosphorylase Kinase; domain 1 56 139 - -
Pte13g00802 527 SUPERFAMILY EF-hand 341 517 IPR011992 -
Pte13g00802 527 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Pte13g00802 527 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Pte13g00802 527 FunFam calcium-dependent protein kinase 13 140 320 - -
Pte13g00802 527 SUPERFAMILY Protein kinase-like (PK-like) 53 321 IPR011009 -
Pte13g00802 527 MobiDBLite consensus disorder prediction 1 21 - -
Pte13g00802 527 Gene3D Transferase(Phosphotransferase) domain 1 140 320 - -
Pte13g00802 527 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Pte13g00802 527 CDD EFh 431 493 IPR002048 GO:0005509
Pte13g00802 527 Gene3D - 321 495 - -
Pte13g00802 527 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Pte13g00802 527 CDD STKc_CAMK 53 311 - -
Pte13g00802 527 Pfam Protein kinase domain 54 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00802 527 SMART efh_1 431 459 IPR002048 GO:0005509
Pte13g00802 527 SMART efh_1 467 495 IPR002048 GO:0005509
Pte13g00802 527 SMART efh_1 359 387 IPR002048 GO:0005509
Pte13g00802 527 SMART efh_1 395 423 IPR002048 GO:0005509
Pte13g00802 527 SMART serkin_6 54 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00802 527 ProSitePatterns EF-hand calcium-binding domain. 404 416 IPR018247 -
Pte13g00802 527 ProSiteProfiles Protein kinase domain profile. 54 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00802 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Pte13g00802 527 ProSiteProfiles EF-hand calcium-binding domain profile. 355 390 IPR002048 GO:0005509
Pte13g00802 527 Pfam EF-hand domain pair 430 493 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00802 Pte-Chr13 6650738 6654069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00802 1 523 EF-hand Containing Proteins AT5G19450 77.799 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte13g00802 Pkinase 4.8e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00802 K13412 - vvi:100258857 926.776