Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00796 ATGGAGAATGGCAGAAAATCTACCCTGAAGTCATGGAAGAAAGGACCAGCTAGGGGGAAAGGCGGCCCTCAGAATGCTTCGTGTGAATACCGGGGTGTTAGGCAAAGAACCTGGGGGAAATGGGTTGCTGAAATAAGAGAGCCAAAGAAGAGAACCAGGCTCTGGCTCGGCTCTTTTGCCACAGCTGAAGAAGCTGCCATGGCTTACGATGAGGCTGCCAGGAGGCTCTATGGTCCAGATGCTTACCTCAATCTTCCTCACATACAACCCAACCCCAGTTCTCACTTGATCAAGTCTCAAAAGTTTAAATGGATGCCATCTAAGAAATTCATTTCCATGTTTCCACCGTGCGGATTGCTCAATATAAACGCTCAGCCTAGTGTCCATGTCATTCATCAGCGGTTAGAACAACTTAAGCAAAATGGGGCTTTCAATCAAAAGCCTCCATCTAATTCATCTTCTTGTGATTCAAAGGCTCCAGCTCAAATCATCGGCAGTGAATCACATTCAGAAAGCGCTCCAATAAAGAAAAAAGATGATGAAATGGGATCAGAAAATATGCTCAGAGATGTTCAGGAGAAACCTCAGATTGATCTTAATGAGTTTCTTGAGCAGTTGGGAATCCTGAAAAACGAACAACAGCCAGAAGGGACTGACAGCTCTGGAAGTTTGGTGACACCAGAAACTTCAACAAAAGATTATGATGAGCTTGACACCTTTGCTGACCAGATAGTCAACTGGGATGCACTGATTGAGATGCATGGAATGGCAGACAATCAGAGACCAGGATTGGACCAGTATCAGATGTATGACACAAATGAGGAGCTCGTTTTGCCTACTTCAATTTGGAATTTCTAG 858 0.4464 MENGRKSTLKSWKKGPARGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHIQPNPSSHLIKSQKFKWMPSKKFISMFPPCGLLNINAQPSVHVIHQRLEQLKQNGAFNQKPPSNSSSCDSKAPAQIIGSESHSESAPIKKKDDEMGSENMLRDVQEKPQIDLNEFLEQLGILKNEQQPEGTDSSGSLVTPETSTKDYDELDTFADQIVNWDALIEMHGMADNQRPGLDQYQMYDTNEELVLPTSIWNF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00796 285 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Pte13g00796 285 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Pte13g00796 285 MobiDBLite consensus disorder prediction 211 233 - -
Pte13g00796 285 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Pte13g00796 285 MobiDBLite consensus disorder prediction 143 185 - -
Pte13g00796 285 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 5 233 - -
Pte13g00796 285 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Pte13g00796 285 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Pte13g00796 285 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Pte13g00796 285 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Pte13g00796 285 MobiDBLite consensus disorder prediction 171 185 - -
Pte13g00796 285 MobiDBLite consensus disorder prediction 1 28 - -
Pte13g00796 285 MobiDBLite consensus disorder prediction 143 169 - -
Pte13g00796 285 MobiDBLite consensus disorder prediction 211 230 - -
Pte13g00796 285 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Pte13g00796 285 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00796 Pte-Chr13 6605186 6606475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00796 5 285 AP2-EREBP Transcription Factor Family AT3G57600 52.650 6.91e-91 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte13g00796 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00796 - - qsu:112016049 399.438