Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00791 ATGGAGGCCAATAATGGGAATGTCAAGTCCAAGTTAGATGACTACGAAGTAATTGAGCAAATTGGAAGAGGCGCGTTTGGGAATGCTTTTCTTGTTCTTCACAAGTCTGAGAAAAAGAAGTATGTGTTAAAGAAGATACGGTTGGCGAAGCAAACAGAGAAGTTCAAAAAGACAGCTCACCAGGAGATGAACTTGATAGCAAATTTGAATAACCCATATATTGTGGAGTATAAAGATTCTTGGGTGGAGAAGGGAGATTGCATTTGCATAGTGACAGGCTATTGCGAAGGAGGTGACATGGCTGAGAACATTAAGAAAGCTAGAGGGACATTTTTTCCAGAGGAGAAGCTCTGCAAATGGTTGGCCCAATTATTGTTAGCTGTGGACTACCTTCACTCTAATCGTGTACTTCACAGAGATCTTAAGTGTTCCAACATATTTCTTACTAAGGAGAATGATGTTCGGCTTGGTGACTTTGGACTTGCAAAGCTGCTCAAGTCTGAAGATCTTGCTTCTTCGGTCGTTGGAACCCCCTATTATATGTGTCCTGAGCTTCTTGCAGATATTCCTTATGGTTATAAATCTGACATATGGTCACTTGGTTGCTGCATGTTTGAGATAGCTGCTCATCAACCAGCTTTTCGTGCTCCAGACATGGCTGCGCTAATCAATAAAATAAACAGATCCTCGATTTCTCCATTACCCATTGTTTATTCTGCCACACTGAAGCAAATCATCAAGAGCATGCTGAGAAAGAACCCGGAACATAGACCAACAGCTGCAGAACTTTTGAGGCACTCCCATTTACAACCATTCATACTTCCTTGTCGTAACGCATCATCTGTATTTCTTCCGATCAAACCTATAAGGTCCCCAAAGGATAAATCCACCAAATCATCTTCTAACAAATCTGCTGGTCGCAAAGATTACCAGAGCAAAGCCAATGGATTAGCTAACCATTTAGAACGTGTTTATCCACAGGACAGAAATGGTGAGTTAGAGCCAAGCCATATGCCAATCACTGAGAAGTCTACATCAACAGCATCGACAAGTGCTGAAGACAACCTGGAGACCGAGATGCTTGATCCTGCTAGTTGCATGGTTGAATCTCATGCTACCAGTGTTTCAGGTGCTGAATCATTCTGTTCTGAGTCTATTGATCCCAATGCAGATAAGCAACTGGAATTTCACTGTATGCCTCTGAAGGCCAGTTCTGATAGTGATATTACCTCACAAGGAACACAGTCTGTGCATGAAAGACAAGGACATACTGAATATTTCCACAAACCAGAACAGACTGATACAATTGGATCTTTGATGGATGATGTAGGAAGAGGTAACCTAGTACTTTACCAAACTGATGTCCAAAGTGATGATGCTGAAATCAGAGATCGAAAGGAACAACTGGATTTTGGTGCTGATAGTAGTAATAAAGATTGGTCCACACGTAAAGAAACATTATCACCAGTCAATGCAGCCATAGAAAACGAGAATAATGCTCAAGAACACGATTCTTCTAGACCAGAACACTGTAATAAGTCATTGATTTCTAGTACAGTCACCACCGATCAAGATGGGTCTCTCTATGAGGAAACTCCATCTCCGGTGCATCTTGCAAAAATTATGTATGATGCTGAATCTGGAAGTAGCTCAGGAAAGAAGGAAAACCCTGATGTCGTTAGAGAAGGTTCTTGCAGAGACTGTCTATCAGTTGAGAATGGTGACAACGACACGAATAGAGCAAAACAAGCAGATATGAAGTGCACTGCGAAATTGGCAACTAATCATAATAGTAATTTGATTAGTAAGATACCTGGTGACATTTCACTGAAAATGCTCCCTGCAATCAGCAGCACTTATTCAAAAAGCGAGTTGAACAGTCTCGGCCAGCAAAGGGCTGATGCTTTGGAGTCTCTGCTGGAGCTATGTGCTCAGCTACTTAATCAGGACAAGATCGAAGAGCTTGCTGGTGTACTTGGACCATTTGGGCAGGAAACTGTTTCTTCCAGAGAGACAGCAATTTGGTTGACAAAGAGCCTCATGTCTGCGCAAAAATTCAATGGCGGAACATAG 2073 0.4192 MEANNGNVKSKLDDYEVIEQIGRGAFGNAFLVLHKSEKKKYVLKKIRLAKQTEKFKKTAHQEMNLIANLNNPYIVEYKDSWVEKGDCICIVTGYCEGGDMAENIKKARGTFFPEEKLCKWLAQLLLAVDYLHSNRVLHRDLKCSNIFLTKENDVRLGDFGLAKLLKSEDLASSVVGTPYYMCPELLADIPYGYKSDIWSLGCCMFEIAAHQPAFRAPDMAALINKINRSSISPLPIVYSATLKQIIKSMLRKNPEHRPTAAELLRHSHLQPFILPCRNASSVFLPIKPIRSPKDKSTKSSSNKSAGRKDYQSKANGLANHLERVYPQDRNGELEPSHMPITEKSTSTASTSAEDNLETEMLDPASCMVESHATSVSGAESFCSESIDPNADKQLEFHCMPLKASSDSDITSQGTQSVHERQGHTEYFHKPEQTDTIGSLMDDVGRGNLVLYQTDVQSDDAEIRDRKEQLDFGADSSNKDWSTRKETLSPVNAAIENENNAQEHDSSRPEHCNKSLISSTVTTDQDGSLYEETPSPVHLAKIMYDAESGSSSGKKENPDVVREGSCRDCLSVENGDNDTNRAKQADMKCTAKLATNHNSNLISKIPGDISLKMLPAISSTYSKSELNSLGQQRADALESLLELCAQLLNQDKIEELAGVLGPFGQETVSSRETAIWLTKSLMSAQKFNGGT* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00791 690 Gene3D Transferase(Phosphotransferase) domain 1 95 275 - -
Pte13g00791 690 Gene3D Phosphorylase Kinase; domain 1 2 94 - -
Pte13g00791 690 MobiDBLite consensus disorder prediction 329 353 - -
Pte13g00791 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pte13g00791 690 SUPERFAMILY Protein kinase-like (PK-like) 12 304 IPR011009 -
Pte13g00791 690 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00791 690 MobiDBLite consensus disorder prediction 339 353 - -
Pte13g00791 690 FunFam Probable serine/threonine-protein kinase nek1 11 94 - -
Pte13g00791 690 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00791 690 MobiDBLite consensus disorder prediction 287 312 - -
Pte13g00791 690 FunFam serine/threonine-protein kinase Nek6 isoform X2 95 283 - -
Pte13g00791 690 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 14 639 - -
Pte13g00791 690 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00791 690 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pte13g00791 690 CDD STKc_Nek 14 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00791 Pte-Chr13 6502596 6507712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00791 9 279 MAP Kinase Kinase Kinase AT3G13530 33.942 4.77e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pte13g00791 Pkinase 8.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00791 K08857 - qsa:O6P43_010168 769.229