Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00790 ATGGCGAAGAAGAAGAAAGATAGGGTTTTGGAGGAAGGATTTATCGAAGAAGATCAAGACAAAGACCGAGACGAAAGGAGTGCCTGCCGAGATCAGTTCGAATCTTCATCCGAAGGCAGAAGTCTTTACGAGGTTCTCGGTGTGGAGAGGACAGCCTCTCAACAGGAAATAAAAAAAGCATACCATAAGTTGGCACTGCGGCTCCATCCTGATAAAAATCCTGGCGATGAGGAAGCTAAAGAGAAATTCCAGCAATTACAGAAAGTGATCTCTATCCTTGGAGACGAGGAGAAGAGAGCTGTTTATGATCAAACTGGCTGTGTTGATGATGCTGACCTTGCTGGAGACACCATTCAGAATCTTCGAGAATACTTCAGAGCAATCTACAAGAAGGTTACTGTGGGTGATATTGAAGAGTTTGAAGCAAAATATAGAGGATCTGAGTCAGAGGAGAAAGATTTGATTGATCTGTACAATAAGTACAAGGGTGATATGAACATGCTTTTCTGTTCAATGATCTGTTCAGACCCTAAGCTCGATTCACACCGTTTCAAGGATGTTTTGGATGAGAGAATTGCAGCTGGAGAATTGAAAGTGACTAAAGGCTACAAAAGGTGGGCGAGGAAAGTATCTGAAACCCAACCACCAACTGGTCATTTGAAGAGGAGGGCTAATAGGTCAAAGCAGCAGGCTGAATCAGATTTACTTGCAATTATTTCTCAACGACAAGCTGAGAGGAAAAATCAGATGAGTTCCATGTTCTCATCTTTGTTGTCCAAATATGGCGGGGATACGTCTGAACCCACTGAGGAAGAGTTTGAAGCTGCGCAGCGAAGATTGGAGAGGAAGAGGTCCTCAAAGAAAATGAAGAGCAAATAA 879 0.43 MAKKKKDRVLEEGFIEEDQDKDRDERSACRDQFESSSEGRSLYEVLGVERTASQQEIKKAYHKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRAVYDQTGCVDDADLAGDTIQNLREYFRAIYKKVTVGDIEEFEAKYRGSESEEKDLIDLYNKYKGDMNMLFCSMICSDPKLDSHRFKDVLDERIAAGELKVTKGYKRWARKVSETQPPTGHLKRRANRSKQQAESDLLAIISQRQAERKNQMSSMFSSLLSKYGGDTSEPTEEEFEAAQRRLERKRSSKKMKSK* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00790 292 SUPERFAMILY Chaperone J-domain 38 123 IPR036869 -
Pte13g00790 292 CDD DnaJ 43 95 IPR001623 -
Pte13g00790 292 MobiDBLite consensus disorder prediction 255 292 - -
Pte13g00790 292 MobiDBLite consensus disorder prediction 265 281 - -
Pte13g00790 292 MobiDBLite consensus disorder prediction 1 39 - -
Pte13g00790 292 Pfam DnaJ domain 42 103 IPR001623 -
Pte13g00790 292 Gene3D DnaJ domain 25 124 IPR036869 -
Pte13g00790 292 ProSiteProfiles dnaJ domain profile. 41 106 IPR001623 -
Pte13g00790 292 MobiDBLite consensus disorder prediction 1 33 - -
Pte13g00790 292 SMART dnaj_3 40 98 IPR001623 -
Pte13g00790 292 MobiDBLite consensus disorder prediction 209 231 - -
Pte13g00790 292 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 33 291 IPR042977 -
Pte13g00790 292 PRINTS DnaJ domain signature 61 76 IPR001623 -
Pte13g00790 292 PRINTS DnaJ domain signature 98 117 IPR001623 -
Pte13g00790 292 PRINTS DnaJ domain signature 78 98 IPR001623 -
Pte13g00790 292 PRINTS DnaJ domain signature 43 61 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00790 Pte-Chr13 6498135 6501391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00790 35 103 C2H2 Transcription Factor Family AT1G74250 41.892 1.30e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00790 K09529 - qsa:O6P43_006547 407.912