Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00789 ATGGCTACATCACGTACAATCTTATTTCTTCTTACTTTATCATTCACACTTCTCTTCATTCCTACCTCTTCTGCATCTGAGTCTCAAATTCTACTCACCTTCAGGGCTTCTATTCAAGACACTAAGAACTCTCTCTCCAGCTGGTCTAACACCTCACTGGCTAGTCACTGCAATTGGACTGGAATCACTTGCTCATCTTCACTCTCTGTAACTTCTATTGACCTTCAAAGCTTAAATATCTCTGGTGATATCTCATCATCAATATGTGAACTTCCATTTTTATCTCACCTCAATCTCGCTGACAATCTCTTCAACCAGCCTATCCCTCTTCATCTTTCTCAGTGTAGTTCTTTACTGACTTTGAATCTAAGTAACAATCTTATCTGGGGTACAATTCCTGATCAGATTTCTCAGTTTAGTTCCTTGAGTGTTCTTGATTTGAGCAGAAACCATATTGAGGGAAAGATTCCAGAAAGCTTGGGCTTCTTAAGGAACCTAACAGTTCTCAACTTGGGAAGCAACCTAATATCAGGTACTGTACCTCCTTTCTTTGGGAATTTCACTGAGCTTCTCGTTCTTGATTTGTCTCAGAACTCGTACCTAGTGAGTGAGATTCCAAGTAGCATTGGACAACTAAAAAGTATTGAGCATCTCGTGCTGCATAGCTCTGGTTTTCAAGGTAAAATTCCAGTGTCTTTTGTCGGGTTGCGCAGTTTGACTCATTTGGATATTTCTGAGAACAATCTAACTGGCGCGATTCCTCAGACATTGTTATCATCTCTAGAGAACATTGTTTCTTTTGATGTTTCGCAAAACAACCTTTTGGGGCCATTTCCAGACAGTATTTGCAAAGGTAGCCGCCTTGTAGATCTTAGTATTCACACAAATTTCTTTACTGGTTCAATCTCCAACTCCATTAGTCAATGCGGAAATCTCGAGAGGTTTCAAGTTCAGAACAATGAATTTTCAGGAGATTTCCCTGATAAACTATGGTCACATCCTAAAATCAAACTCATCAGAGCTGAAAACAACAAATTCTCGGGAGAAATACCAGAGTCTGTGTCAGAAGCTGCTCAACTGGAGCAAGTTCAAGTTGATAACAATAGCTTCGCCAGTAAAATACCTCAGGGTCTTGGAAAGGTTACGAGTTTATATAGATTTTCTGCTTCTCTAAATAGATTCTATGGTGAACTTCCTCCGAACTTTTGTGATTCCCCTGCTATGAGTATAATCAATCTCTCCCATAATTTACTTTCTGGTCAAATTCCTGAGCTGCAAAAATGTCGGAAACTGGTGTCTTTGTCTTTGGCAGATAACAGTCTAACTGGAGAGATACCACAGTCACTTGTTGACTTGCATGTGTTGACTTACCTTGACCTTTCAGATAACAATCTCACAGGATCAATTCCACAAGGCCTGCAGAACTTGAAACTTGCTCTCTTTAATGTGTCATTCAATAGTCTATCTGGTAGAGTACCTCAGGCTTTAATCTCTGGCCTCCCCGCTTCATTTCTGGAAGGAAATCCGGAACTCTGCGGTCCTGGCTTACCAAATTACTGCCCCAATGACCACTATGACCATACTTCTGGGGTCTCAAGTTTTACATGTGCTCTTATCTCAGTCGGCTTTGCTGTAGCAACCGTGATTGTAGCTGGTTGGTTTATAATGTATCATCGGTCTTCAAAGGAAAATCAGCAGGGACAGTGGCGCTCAATGTTTTTCTATCCTCTTAGAATTAATGAACAAGATCTAATATTGGCAATGGATGAGAAAAGCTCAACTCCATATGGCGGTGGTACTTTTGGCAGAGTTTTCATCATGAGCTTACCTAGTGGTGAACAAGTTGCTGTCAAAAAACTTGTCTACTTTGGGAGCCAATCCTCGAGAATTTTAAAGGCTGAGGTCAAGACTCTGGCAAAGATTAGGCACAAGAATATTACGAAAATCTTGGGGTTTTGTCATTCTGATGATTCTATTTTCCTTATCTACGAGCACGTACAGAATGGAAGTTTAGGAGATTTGCTGTCACGGCAAAATTTTGAATTGCAATGGGGTGTTAGATTGAAGATAGCTATTGGGATTGCACAAGGGGTAGCGTATCTTCACAGAGATTATGTTCCACATTTACTTCATAGGAATGTCAAGTCTAGGAACATTCTCTTGAATGCAGACTTTGAACCCAAGCTGACGGATTTTGCCCTCGATCGAATTCTTGGAGAAACTGCTTTTGAGACAACCTTAGCTTCTAAGTTTGCTTCTTCATGTTACAATGCTCCAGAGTGTGGATACAGCAAGAAATCGAGTGAACAATGTGACATCTACAGCTATGGTGTTGTGCTGCTGGAGCTACTGACTGGCAGGCAAGCTGACGAAGCAGAACCAAGTGAGTGTCTTGACATAGTGAAGTGGGTTAGAAGGAAAGTCAATATTAATAATGGAGTATTCCAAGTTCTTGATCCAAAGATATCACAAAGTTCAACGCACCAAATGATTGGAGCTCTAGATATTGCTCTGCGTTGCACTTCTGTGATAGCAGAGAAACGGCCATCCATGATTGAAGTTTTAAGAGCTCTGCAGTCCCTGGAGTCGAAGGCCTAA 2598 0.4095 MATSRTILFLLTLSFTLLFIPTSSASESQILLTFRASIQDTKNSLSSWSNTSLASHCNWTGITCSSSLSVTSIDLQSLNISGDISSSICELPFLSHLNLADNLFNQPIPLHLSQCSSLLTLNLSNNLIWGTIPDQISQFSSLSVLDLSRNHIEGKIPESLGFLRNLTVLNLGSNLISGTVPPFFGNFTELLVLDLSQNSYLVSEIPSSIGQLKSIEHLVLHSSGFQGKIPVSFVGLRSLTHLDISENNLTGAIPQTLLSSLENIVSFDVSQNNLLGPFPDSICKGSRLVDLSIHTNFFTGSISNSISQCGNLERFQVQNNEFSGDFPDKLWSHPKIKLIRAENNKFSGEIPESVSEAAQLEQVQVDNNSFASKIPQGLGKVTSLYRFSASLNRFYGELPPNFCDSPAMSIINLSHNLLSGQIPELQKCRKLVSLSLADNSLTGEIPQSLVDLHVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNSLSGRVPQALISGLPASFLEGNPELCGPGLPNYCPNDHYDHTSGVSSFTCALISVGFAVATVIVAGWFIMYHRSSKENQQGQWRSMFFYPLRINEQDLILAMDEKSSTPYGGGTFGRVFIMSLPSGEQVAVKKLVYFGSQSSRILKAEVKTLAKIRHKNITKILGFCHSDDSIFLIYEHVQNGSLGDLLSRQNFELQWGVRLKIAIGIAQGVAYLHRDYVPHLLHRNVKSRNILLNADFEPKLTDFALDRILGETAFETTLASKFASSCYNAPECGYSKKSSEQCDIYSYGVVLLELLTGRQADEAEPSECLDIVKWVRRKVNINNGVFQVLDPKISQSSTHQMIGALDIALRCTSVIAEKRPSMIEVLRALQSLESKA* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00789 865 Gene3D Transferase(Phosphotransferase) domain 1 667 865 - -
Pte13g00789 865 SUPERFAMILY L domain-like 203 535 - -
Pte13g00789 865 Gene3D Ribonuclease Inhibitor 179 233 IPR032675 -
Pte13g00789 865 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Pte13g00789 865 SUPERFAMILY Protein kinase-like (PK-like) 596 858 IPR011009 -
Pte13g00789 865 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 579 665 - -
Pte13g00789 865 ProSiteProfiles Leucine-rich repeat profile. 454 477 IPR001611 GO:0005515
Pte13g00789 865 FunFam Leucine-rich repeat family protein 26 181 - -
Pte13g00789 865 Pfam Leucine rich repeat 215 274 IPR001611 GO:0005515
Pte13g00789 865 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Pte13g00789 865 Pfam Leucine Rich Repeat 455 476 IPR001611 GO:0005515
Pte13g00789 865 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 860 - -
Pte13g00789 865 SUPERFAMILY L domain-like 24 283 - -
Pte13g00789 865 SMART LRR_typ_2 116 139 IPR003591 -
Pte13g00789 865 SMART LRR_typ_2 91 115 IPR003591 -
Pte13g00789 865 SMART LRR_typ_2 236 260 IPR003591 -
Pte13g00789 865 SMART LRR_typ_2 452 475 IPR003591 -
Pte13g00789 865 SMART LRR_typ_2 187 212 IPR003591 -
Pte13g00789 865 SMART LRR_typ_2 163 186 IPR003591 -
Pte13g00789 865 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 666 865 - -
Pte13g00789 865 Gene3D Phosphorylase Kinase; domain 1 596 666 - -
Pte13g00789 865 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 259 523 - -
Pte13g00789 865 Gene3D Ribonuclease Inhibitor 256 523 IPR032675 -
Pte13g00789 865 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Pte13g00789 865 Pfam Protein tyrosine and serine/threonine kinase 597 854 IPR001245 GO:0004672|GO:0006468
Pte13g00789 865 ProSiteProfiles Protein kinase domain profile. 590 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00789 Pte-Chr13 6463468 6466317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00789 31 861 Receptor kinase-like Gene Family AT5G06940 61.979 0.0 1035
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte13g00789 PK_Tyr_Ser-Thr 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00789 - - qsa:O6P43_006549 1235.32