Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00785 ATGGAGACAGCTGCACTTGGATCGAGCTGCACAGGTGGGCACTACGATGACTCTGGACTCGAGTCCCTCCAATTCCGCGAAGAAATTCAACGTCTGATTACAGCTCCGTCGGAAAACACGAGTTCTTTTACTGCACTTCTTGAACTACCACCCACGCAAGCAATGGAACTCCTTCACTCGCAGGACTCTGATGCAGTGGCTAACGTTGCTAGCATCCCGGAGGACCCAATTCAGCACCAAATCAATGAGCTCAAACCCTACCCTTTCCACAACTTCAATGATAAATTGACTTTCCCCACCAACGTTACGTTGATTGAACGGACCGCCAAGTACTCGGTGTTCGCCGGAGGCAGCTCGCCGATAATGGAGGAAGCCAGCTCAGCTCCGTCTAACTCCAGCGAGAATTTGGATAAGGTGAAGAACGAACATACTGAAACTGATTCCAACCCTAATTTGTCTCAGCCGCTGGGCTCCGATCCAACAGTGCAGAACAAGAACCAGAGAGCGACCAAGAGGAAGGAGCGTGAGAAGAAGGTTAAAGGGTCAACGAAGAAGAAAAAGAGCGTTGCAGATCAGAGCTCTGCGGACGCTGAGAAGCTTCCGTACGTCCATGTCCGAGCTCGTCGTGGTCAAGCTACTGATAGCCATAGCTTAGCAGAAAGAGCAAGGAGAGAGAAAATAAATGCCCGGATGAAGCTTTTGCAAGAGCTGGTCCCCGGTTGTAATAAGATATCAGGTACTGCATTGGTTCTGGATGAAATCATCAATCATGTACAATCTCTACAACGTCAAGTTGAGTTCTTATCCATGAAACTTGCAGCAGTCAACCCAAGAATTGATTGTAATCTTGACAGTTTACTGGATACAGATGGTCCATTACTCATGGATGGTAACTTCACCACCATGGTGCCACCAGCAGTATGGTCAGATTTGTCGGTCAGAGGAACCAGACAGCAATGTCAACCACATTGGCATTTTGATACGTTGCATCAGCCACTTTGGGGCAGGGAAGAAGAGAATCGTAATTTCATAACCTCAGAAAACTCACTCTTAAGCTACGGTTCATCTGCTAATTCAGCTTCAGATCGACTTGGAATGTGGGATAGTTTTATGAACCACGGATAG 1125 0.4756 METAALGSSCTGGHYDDSGLESLQFREEIQRLITAPSENTSSFTALLELPPTQAMELLHSQDSDAVANVASIPEDPIQHQINELKPYPFHNFNDKLTFPTNVTLIERTAKYSVFAGGSSPIMEEASSAPSNSSENLDKVKNEHTETDSNPNLSQPLGSDPTVQNKNQRATKRKEREKKVKGSTKKKKSVADQSSADAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRIDCNLDSLLDTDGPLLMDGNFTTMVPPAVWSDLSVRGTRQQCQPHWHFDTLHQPLWGREEENRNFITSENSLLSYGSSANSASDRLGMWDSFMNHG* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00785 374 MobiDBLite consensus disorder prediction 146 165 - -
Pte13g00785 374 SMART finulus 217 267 IPR011598 GO:0046983
Pte13g00785 374 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 120 343 IPR024097 GO:0006355
Pte13g00785 374 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 209 279 IPR036638 GO:0046983
Pte13g00785 374 Pfam Helix-loop-helix DNA-binding domain 215 262 IPR011598 GO:0046983
Pte13g00785 374 Gene3D - 208 281 IPR036638 GO:0046983
Pte13g00785 374 MobiDBLite consensus disorder prediction 122 202 - -
Pte13g00785 374 Coils Coil 251 271 - -
Pte13g00785 374 FunFam transcription factor bHLH48-like isoform X1 208 280 - -
Pte13g00785 374 CDD bHLH_AtBPE_like 201 286 - -
Pte13g00785 374 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 211 261 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00785 Pte-Chr13 6441132 6446606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00785 3 366 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 51.385 9.89e-101 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte13g00785 HLH 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00785 - - qsa:O6P43_010177 456.832