Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00781 ATGATTCTTCAGTTTCAGGTTGCTTTGCTTTGCATTTGTTTCTTAGCTCATCGCTCCGACTGTCTCAACTCAGACGGTCTAGCACTCCTAGCTTTGAAAGCCGCCATTGAAAGTGATCCATCAGGTGCCCTCAATTCATGGTCTGAGTCTGACTCATCCCCATGTCGCTGGCACGGAGTCCTCTGTACCCATGAAAGAGTTACTCAACTCTTCCTCCCTAACAAGTCTCTCAGTGGCTACGTTCCCTCTGAGCTTGGTCTCCTGAGCTCTCTCAAGCGCCTGACTCTCTCGCACAACAACTTCTCCGGCTTCATTCCTTCTCATCTCTTCAATGCCGCCGATCTCATCGTTCTGGACCTCTCTCGCAACTCACTCTCTGGTCCAATACCAACCCAGATCAAATCACTCAAGCTTCTGAGGCACTTGGATTTATCATCTAATTTCCTTAATGGCTCTCTTCCAGAATCTCTGAATGAGCTAAGTTCCCTCGTTGGAACACTTAACCTTTCGTTCAATGGCTTCATCGGTGAGGTCCCTGTATCCTACGGTCGATTCCCTGTGATGGTCAGCTTGGATCTCCAGCACAATAATCTGACTGGAAAAATCCCTCAAGTAGGTTCATTGGTGAACCAAGGACCTACTGCATTCTCAGGTAACCCAGGGCTTTGTGGCTTCCCGTTGAAAACTCCGTGCCCAGAACCAGAAGCTCAAAAACCCGAGGGCTTCAAGAGTAACCGTGACCCTCAAAATCCTACAGATCCCAACCCGAGTCTGCCTGGCGATGCTGTAGAATCTGATAGAAGAAAATCTCAGGGAGGTGGGTTTGTGACAGTACCACTGGTATCCGGCATTTCTTTGATTGTTGGAGCTGTTTCATTGTCAGCATGTCTGTTTCTGAGAAAGCGATCTTCTGCGGAGGGCATATCGGGCAAAGAAATTTTTTCTGGCGAGACCGAAGACATAGAAGAAGGGCAAAAGGGTAAATTCGTAGTGTTGGACGAAGGGTTTAATCTGGAATTAGAGGATTTGTTGAGGGCGTCGGCGTACGTGTTGGGAAAAAGCAGGAGCGGAATCGTATACAAGGTGGTCGCCGTTAGGAGGGGATCCTCCGCGACACCTTCGGTGATTGCTGTCAGAAGATTGAGTGATAATGACGCTACGTTGAGACTGAAGGATTTCCAATCAGAGGTGGAGGTCATCGGACGGGTGCAGCACCCGAATATCGTCCGGTTGAGAGCATATTACTATGCTGACGATGAGAAACTGCTCGTCAGTGACTATGTCCGCAATGGAAGCTTGCACGCTGCATTACACGATGGTCCTTCGACTGTTTTGCCACTGTTATCATGGACAGCAAGGTTAAGGATTGCTCAAGGAAGTGGTCGTGCTCTGATGTACATTCATGAGTTCAGTCCTCGTAAATATGTTCATGGTAACATAAAATCAACAAAGATCCTACTGGACGATGATTTCCAGCCTTACATATCAGGTTTTGGACTTACTCGCCTTGGCTTAGGCACTGTCAAGTTTACTGCAACCGCATCGAAAGTGCCGAGCAATTCCAACCATTATTTGGCTCCTGAATTGCGCATCTCCAATGCCAAATACACTCAGAAATCCGATGTGTATTCTTTTGGTATCGTGCTGTTGGAGATTTTGACAGGTAGGCTGCCGGATTCAGGACCCGACAATGATGGTAAGGCATTGGAGGGATATGTGAGGAAAGCGTTTAGAGAAGAACGGCCCTTGTCTGAGATCATAGACCCGGGACTTCTGCAAGAGGTGCATGCCAAGAAACAAGTGATTGCTGCATTTCACATTGCACTTAATTGCACAGAGCTTGACCCAGAATTGCGTCCTCGGATGAAAACAGTGTCAGAGAGTCTTGATCGCATCGCATCAAGTCGCAGTGATTAA 1917 0.4778 MILQFQVALLCICFLAHRSDCLNSDGLALLALKAAIESDPSGALNSWSESDSSPCRWHGVLCTHERVTQLFLPNKSLSGYVPSELGLLSSLKRLTLSHNNFSGFIPSHLFNAADLIVLDLSRNSLSGPIPTQIKSLKLLRHLDLSSNFLNGSLPESLNELSSLVGTLNLSFNGFIGEVPVSYGRFPVMVSLDLQHNNLTGKIPQVGSLVNQGPTAFSGNPGLCGFPLKTPCPEPEAQKPEGFKSNRDPQNPTDPNPSLPGDAVESDRRKSQGGGFVTVPLVSGISLIVGAVSLSACLFLRKRSSAEGISGKEIFSGETEDIEEGQKGKFVVLDEGFNLELEDLLRASAYVLGKSRSGIVYKVVAVRRGSSATPSVIAVRRLSDNDATLRLKDFQSEVEVIGRVQHPNIVRLRAYYYADDEKLLVSDYVRNGSLHAALHDGPSTVLPLLSWTARLRIAQGSGRALMYIHEFSPRKYVHGNIKSTKILLDDDFQPYISGFGLTRLGLGTVKFTATASKVPSNSNHYLAPELRISNAKYTQKSDVYSFGIVLLEILTGRLPDSGPDNDGKALEGYVRKAFREERPLSEIIDPGLLQEVHAKKQVIAAFHIALNCTELDPELRPRMKTVSESLDRIASSRSD* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00781 638 FunFam Leucine-rich repeat receptor-like kinase 27 139 - -
Pte13g00781 638 Pfam Leucine rich repeat 90 147 IPR001611 GO:0005515
Pte13g00781 638 Pfam Protein tyrosine and serine/threonine kinase 350 629 IPR001245 GO:0004672|GO:0006468
Pte13g00781 638 FunFam Leucine-rich repeat receptor-like protein kinase 140 233 - -
Pte13g00781 638 Gene3D Transferase(Phosphotransferase) domain 1 428 638 - -
Pte13g00781 638 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 634 IPR046959 -
Pte13g00781 638 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Pte13g00781 638 SUPERFAMILY Protein kinase-like (PK-like) 350 628 IPR011009 -
Pte13g00781 638 MobiDBLite consensus disorder prediction 227 270 - -
Pte13g00781 638 Gene3D Ribonuclease Inhibitor 14 73 IPR032675 -
Pte13g00781 638 Gene3D Ribonuclease Inhibitor 74 234 IPR032675 -
Pte13g00781 638 ProSiteProfiles Protein kinase domain profile. 345 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00781 638 Gene3D Phosphorylase Kinase; domain 1 324 427 - -
Pte13g00781 638 SUPERFAMILY L domain-like 20 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00781 Pte-Chr13 6425796 6429383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00781 22 634 Receptor kinase-like Gene Family AT3G57830 59.443 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte13g00781 PK_Tyr_Ser-Thr 5.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00781 - - qsa:O6P43_006555 866.685