Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00776 ATGGCTTCCAATATTAAAAACAGTCAGCTGGATACGACGACACCTCAACATCATCAGCTACAGCTGCAGCATCAGCACCACCATCAATTTCATCAACATCATCAAATTCCTTTTGGAATGATGCAATCACCTTCATCTTCTTCCATCACTGGAAACTTCATAAGCAAGGATACGGGAGCTTATGAATTAGGAGAATTAGACCAAGCTGTTTTTCTGTATCTGGATGGACAAGACCCCTCCATTGTACAAGACCAGAGACAGAACTTGGGATTGAGGCCACCAACTCTGAACATCTTTCCTTCTCAGCCTATGCATGTGGAGCCACCGTCAAAGAAGGCGGCTAGTCTTATCAACAGTAGCTCCAAGAGACCATCAGAACCATCGAAGGGGTTGACCGACGCAAGAAACAATCCTCCTTCTAAACCAGAACCAGCCAAAGCTGTCAAGCGAGAGAGCAAACGCAAGGGTCCAAGTCCAACGTCGAGTTCAGAGAAGGAAGGACCTAAGACACCCGACCCCAAGACACAAAGAAGACTTGCACAAAATAGGGAAGCAGCCAGGAAAAGCAGGCTTCGGAAAAAGGCATATGTTCAGCAACTAGAGTCAAGTAGAGTTAAACTTAATCAACTCGAGCAAGAATTGCAGCGAACTAGAGCTCAGGGCATATTTTTTGGCGGAAGTGGAGTTGTGGGAGGGGACCAACAAGGACGTCCTGTCGCCGTGAACAATATTAGTTCAGTGTTCGATGTAGAATATGCGAGATGGCTAGAGCAGCACCACCATTTAATGTGCGAGCTAAGAGCTGCACTACAAGAACATATCCCAGAAAATGAGCTTCGACTGTTTGTGGACAATTGCTTTGCACACTACGATGAAATAATGAACCTAAAGAGCATGGTCGCGAAGGCAGATGTATTCCATCTCTTTTCTGGGATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATGGGTGGTTTCAGGCCCTCTGAAGTTATCAAGGTAATTATGAATCAAGTTGAGCCCTTGACTGAGCAACAACTACTGGGTGTATGTGCTTTGCAACAATCAACTAAACAGGCCGAAGAGGCTTTATCGCAAGGGCTTGACGCTTTTAACCAGTCTCTATCAGAAACTATAACCTGGGGTTCATTGACCTATCCCTCTAACGTGAGTAATTACATGGGGCAGATGGCAATTGCAATGAATAAGCTCTCTGCCCTTGAAGGTTTCGTTAGACAGGCGGATAGTTTGAGGCACCATATAATTCACCGTCTGCATCACATCCTCACAACGCGTCAGGCAGCTCGGTGTTTGTTGGCAATTGCAGAGTACTTCCATCGCCTCAGAGCTCTCAGTTCTCTATGGGTATCACGCCCTCGACAAGAATGA 1392 0.4626 MASNIKNSQLDTTTPQHHQLQLQHQHHHQFHQHHQIPFGMMQSPSSSSITGNFISKDTGAYELGELDQAVFLYLDGQDPSIVQDQRQNLGLRPPTLNIFPSQPMHVEPPSKKAASLINSSSKRPSEPSKGLTDARNNPPSKPEPAKAVKRESKRKGPSPTSSSEKEGPKTPDPKTQRRLAQNREAARKSRLRKKAYVQQLESSRVKLNQLEQELQRTRAQGIFFGGSGVVGGDQQGRPVAVNNISSVFDVEYARWLEQHHHLMCELRAALQEHIPENELRLFVDNCFAHYDEIMNLKSMVAKADVFHLFSGMWKTPAERCFMWMGGFRPSEVIKVIMNQVEPLTEQQLLGVCALQQSTKQAEEALSQGLDAFNQSLSETITWGSLTYPSNVSNYMGQMAIAMNKLSALEGFVRQADSLRHHIIHRLHHILTTRQAARCLLAIAEYFHRLRALSSLWVSRPRQE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00776 463 Coils Coil 193 220 - -
Pte13g00776 463 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 172 216 IPR004827 GO:0003700|GO:0006355
Pte13g00776 463 PANTHER TRANSCRIPTION FACTOR TGA9 84 462 - -
Pte13g00776 463 Pfam bZIP transcription factor 174 213 IPR004827 GO:0003700|GO:0006355
Pte13g00776 463 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 177 192 IPR004827 GO:0003700|GO:0006355
Pte13g00776 463 MobiDBLite consensus disorder prediction 92 193 - -
Pte13g00776 463 SMART brlzneu 170 254 IPR004827 GO:0003700|GO:0006355
Pte13g00776 463 FunFam BZIP family transcription factor 173 222 - -
Pte13g00776 463 Pfam Seed dormancy control 263 337 IPR025422 GO:0006351|GO:0043565
Pte13g00776 463 SUPERFAMILY Leucine zipper domain 174 217 IPR046347 GO:0003700|GO:0006355
Pte13g00776 463 Gene3D - 173 222 - -
Pte13g00776 463 MobiDBLite consensus disorder prediction 113 135 - -
Pte13g00776 463 ProSiteProfiles DOG1 domain profile. 245 459 IPR025422 GO:0006351|GO:0043565
Pte13g00776 463 MobiDBLite consensus disorder prediction 144 160 - -
Pte13g00776 463 CDD bZIP_HBP1b-like 174 222 - -
Pte13g00776 463 MobiDBLite consensus disorder prediction 167 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00776 Pte-Chr13 6381880 6387174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00776 51 463 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 61.211 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte13g00776 DOG1 4.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00776 K14431 - tcc:18599070 657.136