Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00768 ATGTACAGGGGACAACAGTACAGTCATCTTTACTTTGCTCGTCTTCACTTGATGAGAACTCTATTATATTCCCTTGTTCCACATTGGAAACCCCATTTACCAGTTTGCACGGTGTTGGGTTTGGAAGAGGGGAAGGAGTGCATTGTAGTAGGGACTCTGTACAAGCACATGAAACTCAAACCTTCTATACTTGAAGAGTATTCGAAGGAGAGGTCTACTGTTCCACTTGTCCGGCCTCATAATTTTATGCATCCAGAGGATCATCTAGTTTTGGAGGATGAGAGCGGAAGAGTTAAGCTTGGAGGAACTAGACTCTTGCCTTCTGCATATGTGACAGGTGTCGTTGTGGCTTTGCATGGGAAGGACAGTGGCTCTGGTGACTTTTTGGTTTTAGATGTTCTGGAAGCTGACCTGCCACCTCAGATTGAATCACCTCTCAAATCAAGGGAAGACAAATACGTAGTTCTTGTGTCTGGGTTGAGCATTGGGAGCCACAAATCTAATCCTCTCCAATTTCAGCTCCTCGTTGATCATATTACTGGACATCTAGGAGATGAAGAGGAGCAAAGTATTGCATCTCAAATAGTTCATGTCGTGATTGCTGGCAATTCAGTTGAGATTCCTCGAGGACTTCTTACTGGACAGACTTTGGCTGCAAAAGAGCAATCAAGACTGTCTGAACCATTAAAGGAACTGGATATCTTATTAAATCAGATTGCTGCCGCTTTGCCTGTCGATATCATGCCTGGACCTGACGACCCCTCTAACTATTCCTTACCACAGCAGCCTCTGCACAGATGCCTTTTCCCTGGGTCATCAGCATATAACACTTTCAGATCCTGTACTAATCCTCATTGTTTTGAGATTGACAACATCAGAATTCTTGGGACTTCAGGTCAGAACATCAATGATCTTGAAAAGTATTCAGAGGCAAATGATAAACTTGACTTCATGGAAAGGATGTTAAGGTGGCGGCATTTGGCACCAACTGCACCTAATACTCTTGGTTGTTATCCTTACACCGATAAGGATCCGTTCTTTATCGAGAGCTGTCCTCATGTATATTTTGTTGGTAACCAAGATAAATTTGATACACGTGTAACAAAAGGATTAGAAGAACAATTGGTGAGACTCGTATGCATTCCAAAATTCAGTGAGACTGGAGTTGTTGTGGTGTTGAATTTGAGAGATCTTGGATGCCATACCCTCAGCTTTGGAACTGAATTGAACTCATAA 1236 0.4272 MYRGQQYSHLYFARLHLMRTLLYSLVPHWKPHLPVCTVLGLEEGKECIVVGTLYKHMKLKPSILEEYSKERSTVPLVRPHNFMHPEDHLVLEDESGRVKLGGTRLLPSAYVTGVVVALHGKDSGSGDFLVLDVLEADLPPQIESPLKSREDKYVVLVSGLSIGSHKSNPLQFQLLVDHITGHLGDEEEQSIASQIVHVVIAGNSVEIPRGLLTGQTLAAKEQSRLSEPLKELDILLNQIAAALPVDIMPGPDDPSNYSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFEIDNIRILGTSGQNINDLEKYSEANDKLDFMERMLRWRHLAPTAPNTLGCYPYTDKDPFFIESCPHVYFVGNQDKFDTRVTKGLEEQLVRLVCIPKFSETGVVVVLNLRDLGCHTLSFGTELNS* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00768 411 Pfam DNA polymerase delta subunit OB-fold domain 6 133 IPR040663 -
Pte13g00768 411 Gene3D - 13 138 - -
Pte13g00768 411 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 1 405 IPR024826 -
Pte13g00768 411 FunFam DNA polymerase delta small subunit 139 411 - -
Pte13g00768 411 FunFam DNA polymerase delta subunit 2 12 136 - -
Pte13g00768 411 Pfam DNA polymerase alpha/epsilon subunit B 154 364 IPR007185 GO:0003677|GO:0006260
Pte13g00768 411 CDD MPP_PolD2_C 153 405 IPR041863 -
Pte13g00768 411 Gene3D - 140 411 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00768 1 410 Core DNA Replication Machinery Family AT2G42120 75.854 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00768 K02328 - gmx:100780072 715.301