Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00754 ATGTCGTGCTGTGGTGGTTCTGAAGAAGAGAGTAGTGGCCCCCCAGCAAATCAATACTCCGAACCATCGAGAGGGGGCCAAGCGTATGGTGGAGCCAATGGGAGAGGAGAGCCAAAAAGTTCCAATATTGTGAAAAGTGGAGCCCCACAGAAAGTCCTACCCATTGAGATACCTGCTATGCCATTGGATGAGTTGAGTCGGCTCACTTCTAACTTCAGTTCAAAAGCTTTGATCGGGGAAGGCTCTTATGGACGAGTTTTCTATGCAAAGCTAAGTGATGATAAGCCTGTAGCGATTAAAAAGCTGGATGCCAGTTCTTCACCAGAACCAGATTCTGATTTCGCAGCTCAGTTATCCGTAGTTTCAAGACTAAAGAATGACCATTTTCTGGAATTGCTTGGATATTGCCTTGAGTCAGACAACCGGATTATGGTATATCAGTATGCAGATAAGGGTTCGTTGCATGACATATTACATGGAAGGAAAGGTGTGCAGGGAGCAGAACCTGGTCCAGCTCTTAGTTGGAATCAGAGAGTTAAAATCGCCTTTGGCGCGGCAAAAGGCCTTGAGTTCCTACATGAAAAGGTTCAGCCTTCCATAGTTCATCGAGACGTTAGATCCAGCAACGTACTATTGTTTGATGATTTTGATGCCAAGATTGCTGATTTCAACATATCGAATCAGTCTTCTGATACTGCAGCTCGACTGCATTCAACAAGAGTTTTGGGAACATTTGGCTACCATGCTCCAGAGTATGCCATGACTGGCCAGATTACTCAGAAGAGTGACGTCTACAGTTTTGGGGTCGTTCTTTTAGAGCTACTGACAGGAAGAAAGCCAGTAGACCACACAATGCCCAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCACGGCTGAGTGAGGACAAAGTGAAACAATGCGTTGATCCCAAGCTAAATGATGACTACCCACCCAAGGCAATTGCTAAGCTGGCAGCGGTTGCAGCACTTTGTGTCCAGTACGAGGCAGATTTCCGGCCAAACATGACAATCGTTGTGAAGGCTCTTCAGCCGCTTCTGAATTCAAGACCAGCAGGGGCAGAATCCAATGCTTAA 1098 0.4627 MSCCGGSEEESSGPPANQYSEPSRGGQAYGGANGRGEPKSSNIVKSGAPQKVLPIEIPAMPLDELSRLTSNFSSKALIGEGSYGRVFYAKLSDDKPVAIKKLDASSSPEPDSDFAAQLSVVSRLKNDHFLELLGYCLESDNRIMVYQYADKGSLHDILHGRKGVQGAEPGPALSWNQRVKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFDDFDAKIADFNISNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNDDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSRPAGAESNA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00754 365 Gene3D Phosphorylase Kinase; domain 1 45 148 - -
Pte13g00754 365 SMART tyrkin_6 72 350 IPR020635 GO:0004713|GO:0006468
Pte13g00754 365 Pfam Protein tyrosine and serine/threonine kinase 75 350 IPR001245 GO:0004672|GO:0006468
Pte13g00754 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Pte13g00754 365 SUPERFAMILY Protein kinase-like (PK-like) 51 350 IPR011009 -
Pte13g00754 365 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Pte13g00754 365 Gene3D Transferase(Phosphotransferase) domain 1 150 363 - -
Pte13g00754 365 MobiDBLite consensus disorder prediction 1 24 - -
Pte13g00754 365 FunFam probable protein kinase At2g41970 45 148 - -
Pte13g00754 365 MobiDBLite consensus disorder prediction 1 47 - -
Pte13g00754 365 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00754 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 358 - -
Pte13g00754 365 FunFam PTI1-like tyrosine-protein kinase 3 150 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00754 Pte-Chr13 6194567 6196933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00754 45 362 Receptor kinase-like Gene Family AT3G58690 43.478 1.06e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pte13g00754 PK_Tyr_Ser-Thr 4.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00754 - - qsa:O6P43_005819 621.313