Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00735 ATGTCTAGTTTGGCAAGAGCAAAATCTGACCAGCTGGTGGAGACAGTAGCGGCAGCTTTCAAGTCGATTACATCATCTAATGAAGCTTCAGCAGTTGCAGCAGAGGGTGGCAGCAACCTGTCAAGAAATTCCAGCAGGCGGCTGATGACAGCGTCACCGGGACGTGGAAATGGCGCTGGCAGACACACACACATAAGGAAATCGAGAAGTGCTCAGATCAAGCTGGACTTGGATGAAGTGAGCAGTGGTGCAGCTCTTAGTAGAGCTTCCAGTGCAAGCTTGGGCCTCTCATTCTCTTTTACCGGTTTCACTTTGCCTCCGGAGGAAATGTCTGACACAAAACCCTTCAGTGACGATGAGATGATACCTGAAGACATTGAAGCTGGATTGCAAAAGCCCAAGTTTCAGACAGAGCCTACCTTACCTATACATCTCAAGTTCACGGATGTCACCTACAAGGTTGTGCTCAAAAGATTGACAACACATGAGGAGAAGGCTATCTTGCATGGCATTTCTGGTTCTGTCAATCCTGGAGAAGTTTTAGCATTAATGGGTCCATCAGGAAGTGGAAAGACAACGCTTCTGAATCTGATTGGGGGAAGGTTAGCTCAGCAAGCTATTGGTGGCTCTGTTACTTACAACGACCAACCATATTCCAAGTTCCTCAAAAGCAGGGTCGGATTTGTGACACAAGATGATGTTCTGTTTCCTCACCTTACTGTGAAGGAAACATTGACATATGCCGCACTTCTACGAATGCCAAAAACTTCAACGAAGGAGCAGAAGAAAAAACGTGCTATGGATGTCATCTATGACCTAGGACTAGAGAGATGCCAGGACACTATGATCGGTGGCTCCTTTGTTCGTGGGGTATCAGGTGGAGAAAGAAAAAGAGTTTGTATTGGCCACGAGATTATAATCAACCCGTCTCTTCTGTTTCTTGATGAACCGACTTCTGGTCTAGATTCGACAACTGCGCTAAGGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACCGTGGTGACTACGATTCATCAACCCTCAAGCAGACTCTTCCACAAATTTGATAAGTTGATCGTTTTAGGCAAAGGGTGCCTGCTTTACTTTGGGAAGGCTTCAGATGCAATGCCTTACTTCCAATCGATAGGGTGTTCCCCTCTTATTTCCATGAACCCAGCAGAGTTTCTGCTAGACCTTGCTAATGGAAACATCAATGATGTTTCTGTTCCATCAGAGTTAGAGGACAGAGTGCAAATGGAAAACTCTGAAACTGAAGTAAGACATGGGAAACCATCACCAGCAATTGTGCATGAGTATCTAGTCGAGGCCTACGAAACACGAGTTGCAGAAGCAGAGAAGAAGAAAATAATGGACCATCCTGGAAATCTGGATAAAGAACTGAAGTTCAAACTAGGCCACACTAAAAAGCGATGGGGGGCAAGTTGGTGGCAACAGTATTCGATATTGTTTGTAAGAGGTATTAAAGAGCGAAGGCATGAATATTTTAGCTGGTTGAGAATAACACAGGTTCTCTGCACTGCAATAATCCTTGGATTGCTATGGTGGCAGTCAGATGGTAAAACACCAGAAGGTCTGCATGATCAGGTGAGACAATATGCATTCAAGTTTGTTGGTACCAAAATAAGAATGCAAATTTTTATCTGTTCATGA 1680 0.4464 MSSLARAKSDQLVETVAAAFKSITSSNEASAVAAEGGSNLSRNSSRRLMTASPGRGNGAGRHTHIRKSRSAQIKLDLDEVSSGAALSRASSASLGLSFSFTGFTLPPEEMSDTKPFSDDEMIPEDIEAGLQKPKFQTEPTLPIHLKFTDVTYKVVLKRLTTHEEKAILHGISGSVNPGEVLALMGPSGSGKTTLLNLIGGRLAQQAIGGSVTYNDQPYSKFLKSRVGFVTQDDVLFPHLTVKETLTYAALLRMPKTSTKEQKKKRAMDVIYDLGLERCQDTMIGGSFVRGVSGGERKRVCIGHEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLIVLGKGCLLYFGKASDAMPYFQSIGCSPLISMNPAEFLLDLANGNINDVSVPSELEDRVQMENSETEVRHGKPSPAIVHEYLVEAYETRVAEAEKKKIMDHPGNLDKELKFKLGHTKKRWGASWWQQYSILFVRGIKERRHEYFSWLRITQVLCTAIILGLLWWQSDGKTPEGLHDQVRQYAFKFVGTKIRMQIFICS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00735 559 MobiDBLite consensus disorder prediction 31 68 - -
Pte13g00735 559 Pfam ABC transporter 168 319 IPR003439 GO:0005524
Pte13g00735 559 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 145 391 IPR003439 GO:0005524
Pte13g00735 559 SMART AAA_5 177 368 IPR003593 GO:0016887
Pte13g00735 559 Pfam ABC-2 type transporter 348 410 IPR043926 GO:0140359
Pte13g00735 559 MobiDBLite consensus disorder prediction 31 51 - -
Pte13g00735 559 CDD ABCG_EPDR 142 373 - -
Pte13g00735 559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 383 IPR027417 -
Pte13g00735 559 Gene3D - 144 384 IPR027417 -
Pte13g00735 559 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 111 542 - -
Pte13g00735 559 FunFam ABC transporter G family member 22 155 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00735 Pte-Chr13 5965707 5970163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00735 143 405 Calmodulin-binding Proteins AT2G36910 27.509 2.07e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00735 K05681 - tcc:18598463 838.95