Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g00727 | ATGAATACCACATCTGACACCGGAGGATTCCTTGGTTCTAGCCACCTTGGTGGTTTTGGCTATGGAGTAGGATGCTCAGTTGGAATTCTCCTCCTCATCACAACCATCACCCTTGCTTCTTATTTCTGCACTAGGAACCAGCAGCCACCAGAACCATCCCCTCCGAGAATTTCCCATGTGGTCATGGCACCAGCTGCAAATGAGCATTGCGTCATGGATGTAGGCCTAGATGAAGCCACTCTCTTGAGCTATCCAAAGCTGCTGTATTCCGAAGCCAAGATCCGGAAGTCAGATTCTACAGCAACTTGTTGTTCCATATGTCTGGCCGATTACAAGAGCTCTGATATGCTTCGTGCGTTGCCTGATTGTGGGCACCTCTTCCATGTCAAATGTGTGGACCCGTGGTTGAGACTACACCCCACATGTCCAGTCTGCAGAACATCTCCCATTCCAACACCACTCTCAACCCCGCTGGCTGAAGTGGTTCCATTGGCAATGAGGAGGGATTCATAA | 513 | 0.499 | MNTTSDTGGFLGSSHLGGFGYGVGCSVGILLLITTITLASYFCTRNQQPPEPSPPRISHVVMAPAANEHCVMDVGLDEATLLSYPKLLYSEAKIRKSDSTATCCSICLADYKSSDMLRALPDCGHLFHVKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLAMRRDS* | 171 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g00727 | 170 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 160 | IPR045899 | - | |
Pte13g00727 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 104 | 146 | IPR001841 | - | |
Pte13g00727 | 170 | SMART | ring_2 | 104 | 145 | IPR001841 | - | |
Pte13g00727 | 170 | Pfam | Ring finger domain | 104 | 146 | IPR001841 | - | |
Pte13g00727 | 170 | SUPERFAMILY | RING/U-box | 87 | 151 | - | - | |
Pte13g00727 | 170 | CDD | RING-H2_EL5-like | 103 | 146 | - | - | |
Pte13g00727 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 150 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g00727 | Pte-Chr13 | 5912106 | 5912618 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g00727 | 6 | 165 | C3H Transcription Factor Family | AT2G35910 | 60.870 | 1.10e-56 | 175 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g00727 | - | - | qsa:O6P43_009684 | 241.506 |