Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00715 ATGACGACGTACTTCCAAGGTAGTTCAGAAATTCAAGTAGCTGATGGCCTTCAAACACTTGTACTCATGAATCCTGGTTACATTCAGTACTCTGACACTCCGCCGCCACAGCAGCCACCACCGCATGCCAGCAACCAGGTCTTCCTCAACTCAGCTTCCACCAACGTCTCGCTCACTCCTCAAACCCTCTCCCATGCAACTTCGACTCGAATGCAGCAATTTGTCGGTATCCCTATTCAAACATCTGCCACGCAAGATCCACACCATCCTTCCGTTCATGCTCAACTTGATGTCGCTGCCTTGCATGGATTTGGTCCTCGCATGCAGTACAACCATTGGAATGTAGTTGACCGCAATACGGTGGAGCGTGATACTCCAAGCGCTCAACAAGGATTGTCTCTGAGTCTTTCTCCTCATCAGGCTCGATATGGGTCATTTGGGGTTGACCGTGAAGTACCTGCACAAGCTCACGGACCAGCCATATCAGGAGATGATGTGCGCGTGGTGCCAGGTACAACTTCTTCATCCGCTTCCGGGGTTACCAACGGGGTTTGTGGTGTGCAGGGTGTTCTATTGCGCTCCAAGTTTCTGAAAGCTGCACAGGAACTGTTAGATGAAGTTGTCAATGTTAATAATCAGAATTTCGCTACCAAGACTGAACTGGTTAAGAAGACCAATCTGCAGAACAAGGAAACGGGCGAGTCATCTACAGCTGCTAGTGGCGACAGTTCTACTGGCGTGGAGGCGAGCTTGAAGCATGGCAGTGAGCTATCAACTGCAGAGAGGCAGGAAATTCAAATGAAGAAAGCAAAGCTAATCAACATGCTTGATGAGGTGGAACAGAGGTATAGGCAGTACTACCATCAGATGATGATCCTGATTTCTTCATTTGAACAAGCTGCTGGAATTGGGTCTGCTAGGACATACACTGCCCTTGCTCTGCAAACGATCTCAAGGCAGTTTCGTTGCTTAAAGGATGAAATAACTGGCCAAATCAGAGCTGCCAACAAGAACATGGGGGAAGAGGATTGCCTTGGGGGCAGAATTGAAGGTTCAAGGTTGAAATTTGTAGACAATCATCTTAGGCAACAACGTCCTCTTCAACAAATGGGAATGATCCAGCACAATTCATGGAGACACCAGAGAGGATTGCCAGAAAGATCCGTTTCTGTTCTTCGTGCTTGGCTCTTTGAACATTTCCTACACCCTTATCCCAAGGATTCGGACAAACATATACTTGCTAAACAAACAGGGCTTACTAGAAGCCAGGTGTCCAATTGGTTCATCAATGCTCGAGTCCGGCTATGGAAACCAATGGTGGAAGAAATGTACATGGAGGAGATTAAGGAGCAGGAAAAGAGTGGATCAGAAGATAAAACAAGCAATGCCATGCAGGACGAAATGGGAGTGAGTGTGACTGACAAGCAAAAAGCATTGACATCAAGATCGCCAACCGTAGTCGACGCTCGTAATCAATCAGGATTGAGCCTAATGGGTTCGTCTGAGTTAGATGGCATCACTCAGGGAAGTCCCAAGAAACCAAGGAACCACGAAATGCTGTATTTGCCAAATAATGTGGCACCTGTTGGCCTGGATATGGGGTCCAACGAGACAGGCAATGAATCGATGACAATAAAATTTGGTGATGAAAGGCAGAGTAGAGGTGGCTACTCATTTATGGGAGGACAAAGCCACTTCATCGGAGGTTTTGGACAATACCCAATAGGAGAAATTGGAAGGTTTGATGCAGAGCAATTTACACCAAGTTTTTCAGGTAATGGGATTTCACTCACACTTGGTCTGCCGCACTGTGAAAACCTCTCATTGTCAGGAACTCATCAAACGTTTCTTCCCAACCAGAACATTCAACTCGGACTAACAGCGGATATCAGTGAACCAAATGAATTTGGTGCCATAGGCACGTCCACACCATCCTTCATTAGCATATGA 1950 0.4677 MTTYFQGSSEIQVADGLQTLVLMNPGYIQYSDTPPPQQPPPHASNQVFLNSASTNVSLTPQTLSHATSTRMQQFVGIPIQTSATQDPHHPSVHAQLDVAALHGFGPRMQYNHWNVVDRNTVERDTPSAQQGLSLSLSPHQARYGSFGVDREVPAQAHGPAISGDDVRVVPGTTSSSASGVTNGVCGVQGVLLRSKFLKAAQELLDEVVNVNNQNFATKTELVKKTNLQNKETGESSTAASGDSSTGVEASLKHGSELSTAERQEIQMKKAKLINMLDEVEQRYRQYYHQMMILISSFEQAAGIGSARTYTALALQTISRQFRCLKDEITGQIRAANKNMGEEDCLGGRIEGSRLKFVDNHLRQQRPLQQMGMIQHNSWRHQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEKSGSEDKTSNAMQDEMGVSVTDKQKALTSRSPTVVDARNQSGLSLMGSSELDGITQGSPKKPRNHEMLYLPNNVAPVGLDMGSNETGNESMTIKFGDERQSRGGYSFMGGQSHFIGGFGQYPIGEIGRFDAEQFTPSFSGNGISLTLGLPHCENLSLSGTHQTFLPNQNIQLGLTADISEPNEFGAIGTSTPSFISI* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00715 649 CDD homeodomain 378 439 IPR001356 GO:0003677
Pte13g00715 649 MobiDBLite consensus disorder prediction 226 252 - -
Pte13g00715 649 Pfam Associated with HOX 190 329 IPR006563 -
Pte13g00715 649 SMART HOX_1 378 442 IPR001356 GO:0003677
Pte13g00715 649 MobiDBLite consensus disorder prediction 226 260 - -
Pte13g00715 649 Coils Coil 262 289 - -
Pte13g00715 649 Gene3D - 381 460 - -
Pte13g00715 649 Pfam Homeobox KN domain 395 434 IPR008422 GO:0003677|GO:0006355
Pte13g00715 649 MobiDBLite consensus disorder prediction 461 487 - -
Pte13g00715 649 FunFam BEL1-like homeodomain protein 9 381 443 - -
Pte13g00715 649 SUPERFAMILY Homeodomain-like 379 445 IPR009057 -
Pte13g00715 649 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 58 460 - -
Pte13g00715 649 ProSiteProfiles 'Homeobox' domain profile. 375 438 IPR001356 GO:0003677
Pte13g00715 649 SMART prehox3 185 330 IPR006563 -
Pte13g00715 649 MobiDBLite consensus disorder prediction 449 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00715 Pte-Chr13 5823180 5827787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00715 1 637 Homeobox Transcription Factor Family AT2G35940 49.034 7.44e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte13g00715 POX 1.1e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00715 - - qsa:O6P43_006028 897.886