Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00711 ATGTCTTCAGTGGGAAGAGGGAATACAATGGCGGGGGTCGGAGTCGGGCTCTTTCTTTCGCTTGTCGCAGTGGTGGTGGTTGGGGATACAGATCCAAATGACCTTGCAATTCTTACCCAGTTCAGAGAAAACTTGGACAACCCCGAACTCCTGCCTTGGACTGAGAACCATGACCCATGCGGCAGTCCTGGATGGAAATACGTCTACTGTGAAGGTAACAGAGTGGCTCAAATTCAAGTTGCGGGACTGCAGCTGTCAGGTCCTCTGCCAAAGAATTTTAACCAGCTTTCTATGCTGAAAAACCTTGGTTTGCAGAAGAACATGTTCAGTGGTCCTCTCCCAACGTTCAGAGGGTTATCAAAGCTCCAGTTTGCTTATTTGGATTACAACTTGTTTGAAACAATTCCAAGTGATTTCTTTGACGGCTTAGTGAGTTTGCAGGTCTTGGCTTTGGATTACAACAATTTGAATGCCACTACTGGGTGGCATTTCCCGATCCAGTTGAAGGATTCTGTTCAGTTGACTAATCTTACGTGCATGACTTGTAACTTGGTTGGTCCATTACCAAGTTTTCTAGGGGAAATGTCTTCTTTGTCAGTGTTGAAACTGTCTGGAAACAATTTGAGCGGTGAAATTCCGGCTAGTTTTAATGGAAAGATTTTGCAGGTTCTGTGGTTGAACAATCAAAATGGCGGTTGTATGACTGGTCCTATCGATGTGGTGGCAACTATGGCGTCTCTGACAAGTTTGTGGCTTCACGGGAACCAGTTCACAGGCACTATTCCAGAGAACATTGGGAACTTGACTCTTCTGAAAGATCTCAACTTGAACGGTAACAAACTTGTCGGTCCAGTTCCGGAGAGTTTAGCCAATATGGACTTGGATAATTTAGATTTGAACAATAATTTTCTGATGGGTCCGATTCCAAAATTTAAAGCAGCTAATGCATCTTTCGTATCAAACTCATTTTGTCAATCGAAACCTGGAGCTCCTTGTGCTCCCGAAGTCATGGCATTGATAGATTTTCTTGGTGACCTCAATTATCCTGTAAATCTAGTTCAGTCGTGGTCCGGTAATAACCCATGTGATGGACCGTGGCTTGGATTGAATTGCAATCTTGATTCTTCAGTGACTCTTATTAATCTGCCCAACTTTAATCTCAGTGGCACACTTAGTCCTTCAGTTGCAAAGTTAGGATCTTTGTCCCAAATCAGATTGGAGAACAATAGGTTGAGTGGTGCAATACCGAGTAACTGGACGAGCTTAAAATCTTTAACGATGTTGGACCTTAGCAACAACGACATCTCCCCTCCATTGCCACAGTTTAGTGGCACTGTGCATGTTCTCTTCAGTGGAAACGCTCTCTTGAATGCCAAGGGGACTGCAACACAGCCCTTAATAGGCAATAATGGAGGATCGCCACATGATGTTCCATCTACACCACATTCATTGGTACAACCGTCGAAATCAAAGAATTCTACAAGAACCCCTTTGGTTGCAATTGTTGCCCCCATAGCAGGTGTAGGAGCTGCTGCTTTTCTACTGATCCCTGTATTCATCTATTGCCGTAAGAAGCAAAAGGACTCTTCCCCAGGTCCAGCTGCACTGGTAATTCATCCCAGGGATCCATCAGATTCAGATGATACAATAAAAATTGCTGTAGCAAATAATACAAATAGAACTGGTTCCACAGTAACGGGTAGTGGTTCTAGAAGCATAAACAGCAGTGTAAATGGGGAGTTTCATGTCATTGAAGCTGGAAAGGTAGTCATATCAGTCCAAGTTCTTCGAAATGTCACCAATAATTTTTCCGCTGAAAATGAGCTTGGTCGTGGTGGATTTGGTGTAGTTTATAAGGGGGAACTGGATGATGGGACGGAAATAGCGGTGAAGAGGATGGAAGCAGGTGTTATTAGTAGCAAAGCGTTGGATGAATTCCAGTCTGAAATTGCTGTTCTTTCTAAGGTTCGGCACCGTCATTTAGTGTCACTTCTGGGATATTCGGTAGAAGGGAACGAGAGAATTCTAGTCTATGAGTATATGCCTCAAGGGGCTCTGAGCAAGCATCTTTTCCATTGGAAGAGCTTCAAACTAGATCCTCTTAGTTGGAAGAGGAGACTAAGCATTGCCTTGGACGTTGCTAGAGGCATGGAGTATCTTCATACTCTGGCCCATCAGAGCTTCATACATAGAGATCTTAAATCATCGAACATTTTGCTTGGAGATGATTTTAGAGCTAAAGTCTCGGATTTTGGGTTGGTAAAGCTTGCTCCTAATGGGGAACAATCTATTGTGACGAGGCTTGCTGGGACTTTTGGATACCTTGCACCAGAATATGCAGTGACAGGAAAAATCACTACTAAAGCAGATGTTTTCAGTTTTGGGGTTGTGTTGTTGGAGTTGCTGACTGGATTGCCAGCACTTGACAAAGACAGATCCGAGGAAAGCCAGTACCTGGCAGCATGGTTCTGGCATATAAAATCAGACAAGGAGAAACTGAGTGCTGCCATTGATCCAGCACTTGATGTGAGAGAAGAAACATTTGAAAGCATCTCCATCATAGCTGAACTAGCTGGGCACTGCACTGCAAGGGAACCTAATCAGCGGCCAGATATGGGTCATGCTGTGAATGTTCTAGCCCCACTTGTTGAAAAATGGAAACCTATTGATGAAGATTCTGAAGAGTACTCAGGTATCGACTATAGCCTTCCGCTGGACCAAATGGTGAAGGGGTGGAAGGATGGAGAAGGCAAAGATCTCAGCTGTATGGATTTGGAAGATAGTAAGGGCAGTATACCTGCAAGGCCTACTGGATTTGCCGAGTCTTTTACTTCTGCTGATGGTCGGTGA 2850 0.4418 MSSVGRGNTMAGVGVGLFLSLVAVVVVGDTDPNDLAILTQFRENLDNPELLPWTENHDPCGSPGWKYVYCEGNRVAQIQVAGLQLSGPLPKNFNQLSMLKNLGLQKNMFSGPLPTFRGLSKLQFAYLDYNLFETIPSDFFDGLVSLQVLALDYNNLNATTGWHFPIQLKDSVQLTNLTCMTCNLVGPLPSFLGEMSSLSVLKLSGNNLSGEIPASFNGKILQVLWLNNQNGGCMTGPIDVVATMASLTSLWLHGNQFTGTIPENIGNLTLLKDLNLNGNKLVGPVPESLANMDLDNLDLNNNFLMGPIPKFKAANASFVSNSFCQSKPGAPCAPEVMALIDFLGDLNYPVNLVQSWSGNNPCDGPWLGLNCNLDSSVTLINLPNFNLSGTLSPSVAKLGSLSQIRLENNRLSGAIPSNWTSLKSLTMLDLSNNDISPPLPQFSGTVHVLFSGNALLNAKGTATQPLIGNNGGSPHDVPSTPHSLVQPSKSKNSTRTPLVAIVAPIAGVGAAAFLLIPVFIYCRKKQKDSSPGPAALVIHPRDPSDSDDTIKIAVANNTNRTGSTVTGSGSRSINSSVNGEFHVIEAGKVVISVQVLRNVTNNFSAENELGRGGFGVVYKGELDDGTEIAVKRMEAGVISSKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMPQGALSKHLFHWKSFKLDPLSWKRRLSIALDVARGMEYLHTLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPNGEQSIVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLLELLTGLPALDKDRSEESQYLAAWFWHIKSDKEKLSAAIDPALDVREETFESISIIAELAGHCTAREPNQRPDMGHAVNVLAPLVEKWKPIDEDSEEYSGIDYSLPLDQMVKGWKDGEGKDLSCMDLEDSKGSIPARPTGFAESFTSADGR* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00711 949 FunFam Receptor-like kinase TMK4 32 329 - -
Pte13g00711 949 Pfam Leucine rich repeat N-terminal domain 335 372 IPR013210 -
Pte13g00711 949 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Pte13g00711 949 SMART serkin_6 603 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00711 949 SUPERFAMILY L domain-like 334 444 - -
Pte13g00711 949 ProSiteProfiles Protein kinase domain profile. 603 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00711 949 Gene3D Ribonuclease Inhibitor 32 330 IPR032675 -
Pte13g00711 949 Gene3D Phosphorylase Kinase; domain 1 564 680 - -
Pte13g00711 949 FunFam Leucine-rich repeat receptor-like kinase 334 459 - -
Pte13g00711 949 Pfam Protein kinase domain 605 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00711 949 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Pte13g00711 949 SUPERFAMILY Protein kinase-like (PK-like) 587 879 IPR011009 -
Pte13g00711 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Pte13g00711 949 CDD STKc_IRAK 609 882 - -
Pte13g00711 949 MobiDBLite consensus disorder prediction 468 491 - -
Pte13g00711 949 Gene3D Ribonuclease Inhibitor 334 459 IPR032675 -
Pte13g00711 949 FunFam receptor protein kinase TMK1 681 898 - -
Pte13g00711 949 FunFam receptor protein kinase TMK1 565 680 - -
Pte13g00711 949 PANTHER OSJNBA0070M12.3 PROTEIN 18 949 - -
Pte13g00711 949 SUPERFAMILY L domain-like 30 311 - -
Pte13g00711 949 MobiDBLite consensus disorder prediction 925 949 - -
Pte13g00711 949 SMART LRR_typ_2 422 444 IPR003591 -
Pte13g00711 949 SMART LRR_typ_2 119 142 IPR003591 -
Pte13g00711 949 SMART LRR_typ_2 143 163 IPR003591 -
Pte13g00711 949 SMART LRR_typ_2 244 268 IPR003591 -
Pte13g00711 949 SMART LRR_typ_2 398 421 IPR003591 -
Pte13g00711 949 SMART LRR_typ_2 195 218 IPR003591 -
Pte13g00711 949 Gene3D Transferase(Phosphotransferase) domain 1 681 899 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00711 Pte-Chr13 5771822 5775590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00711 78 916 Receptor kinase-like Gene Family AT1G55610 29.757 2.77e-82 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pte13g00711 PK_Tyr_Ser-Thr 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00711 K00924 - qsa:O6P43_009671 1417.14