Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00706 ATGGCTGACAAACACTCCCATCTGAACGGAGCCTACTACGGCCCTTCCATCCCTCCGCAGGAAAATCGAAGAACCTATCATCGCCCTGGACGTGGCGGCGGTTGGGGTGCCTGCTGCTGCTGTGAATGTCTTTTTAATTGTGTCTGTGGCTGTATTTTTCAACTGCTATGCACCCTCCTTGTCATCATTGGGGTCATCATTCTTTTGTTCTGGCTGGTCGTCCGTCCTCACAGGGTTAAGTTCAATGTAACCGATGCCTCCCTCACCCAATTTGATTACACCAATGGTACCCTCCGCTACGATCTGGCTCTAAACCTCACGGTTCGAAACCCCAACAAAAGGGTCGGGATTTACTACGACAGCATCGAAGCCAACGTGTTCTTTGAGGACCAGAGGTTCAGTACCAAGAGCTTGACTCCTTTTTACCAAGGGCATAAGAACACCACTGTTTTGAACCCTGCATTCAAAGGCCAACAGTTACTAGTGCTGAACAGGGATGGTATTTCCCAGTTCAACGAGGATAAGTCAGATGGGTCCTTTGACATGAAACTCAAGCTTTATTTTAGAATTAGGTTGAAGATGGGCCTCATCAAAGTTGGCCAATTCAAACCCAAGATCGATTGTAATATGAAGGTTCCGTTGACTGCCAATGGAACATCAGTGGGTCAGTTTGAGGCCTCTGGTTGCAGTCTTGATTTGTAG 702 0.4772 MADKHSHLNGAYYGPSIPPQENRRTYHRPGRGGGWGACCCCECLFNCVCGCIFQLLCTLLVIIGVIILLFWLVVRPHRVKFNVTDASLTQFDYTNGTLRYDLALNLTVRNPNKRVGIYYDSIEANVFFEDQRFSTKSLTPFYQGHKNTTVLNPAFKGQQLLVLNRDGISQFNEDKSDGSFDMKLKLYFRIRLKMGLIKVGQFKPKIDCNMKVPLTANGTSVGQFEASGCSLDL* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00706 233 Pfam Late embryogenesis abundant protein 105 208 IPR004864 -
Pte13g00706 233 PANTHER OS05G0367900 PROTEIN 47 217 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00706 Pte-Chr13 5740715 5741416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00706 73 220 SNARE and Associated Proteins AT1G32270 38.255 2.03e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00706 - - qsa:O6P43_006020 278.87