LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte13g00700	ATGCAAAGAAACCACATGGGAAAGAAGATGAAGCTTCCCATTCTCCTTAAGCACTCGTACATAAAATCTTCATCATGGCAATGGTCTTCATGTAACCAACCTAGAACCCTCTCTTTCCGGAACAAGAATGAAATCTTCAAGACCATGAACTCAGCCTACGTAGACGCCACCCTTGATTTGTTGGAAAACCCTGATCGCTCTTTCTTCACTAACTCCTGCACCAATTCTACCAGTTTGTCCACTGTATCTGAAGTCTCTAGGTGGGGAGAGGATCCAATAGAGACTGTAATTCGTGGGTTGCAGTCAGAACGGCTGTTCTTCGAGCCAGAAGAGACAAGTTCTATCTTGCAATCTAAGGCCGCACCACAAGGGTTGCCTTTCAAAGAAAGTCTGATACTATCCATGGAGTCCAAAGATCCTTTGGTTGATTTTCGCAAGTCAATGGAGGAAATGGTGGAGGCGCATGGCGTGAACGACTGGGACGGTTTACAAGAGCTTTTGTCATGGTATTTAAGAGTCAACGGGAAAAGCAACCATGGCTATATAGTTGGAGCATTCGCGGACTTGTTGGTTGGTGTAGCCATATCAGGTTCTTGTTCTTGTGCTTCACCTGGTTGTTATCATTCTGCTTCTTCTCTTCTATCACTTTACGCTTCATATTCTTCTTCATCGTTGAGCACTCACTGTGTGTCTTGTTTGGAAGCTGGGGAAGAACTCTATAGCACTAGTAGTATAATTCCTTCCTCATCTACTCGGATTTTAGAAGGTAAGAAGTTGGGTTCAGAAACCATGGATGGTGATTCGACATCTTCAAATGTTGGATAA	825	0.4376	MQRNHMGKKMKLPILLKHSYIKSSSWQWSSCNQPRTLSFRNKNEIFKTMNSAYVDATLDLLENPDRSFFTNSCTNSTSLSTVSEVSRWGEDPIETVIRGLQSERLFFEPEETSSILQSKAAPQGLPFKESLILSMESKDPLVDFRKSMEEMVEAHGVNDWDGLQELLSWYLRVNGKSNHGYIVGAFADLLVGVAISGSCSCASPGCYHSASSLLSLYASYSSSSLSTHCVSCLEAGEELYSTSSIIPSSSTRILEGKKLGSETMDGDSTSSNVG*	275

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte13g00700	274	ProSiteProfiles	OVATE domain profile.	133	192	IPR006458	-
	Pte13g00700	274	NCBIfam	uncharacterized plant-specific domain TIGR01568	133	192	IPR006458	-
	Pte13g00700	274	Pfam	Transcriptional repressor, ovate	137	192	IPR006458	-
	Pte13g00700	274	PANTHER	TRANSCRIPTION REPRESSOR OFP7-RELATED	65	193	IPR038933	GO:0045892

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte13g00700	Pte-Chr13	5680348	5681420	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	OFP	Pte13g00700		Ovate	2e-23	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte13g00700	-		-	tcc:18598361	266.544