Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00680 ATGGTGGGGAAGAAGGTGAGGTCGCTAAAGAAACTAGCCAAGATGGCGAAGGTAACTGGAGGTGAAGCTGATGGATTATATTGGCGTGAGTGCCTGCTTAAAAAGCACGCAGAAAGATCTCCGACCCGTACAAAGACGTCAACCCCAACTGGATTTTTTGCAGTTTATATAGGGGAGGAACGTCAGCGGTTTGTGGTGCCAATCAACTACTTGTCTCACCCGCTGTTCAAGATATTGTTGGAGAAGACATACGATAAATTCGGGTTTCAGCAGAGCAATGGTCTGGTTGTTCCATGTACTGTGTCCACATTTCAGGAGGTAATAGACGGTGTAGAATGCAATCATGGCAACTTTGACTTGAGCAGTATCTTATACGAGCTTTAG 384 0.4557 MVGKKVRSLKKLAKMAKVTGGEADGLYWRECLLKKHAERSPTRTKTSTPTGFFAVYIGEERQRFVVPINYLSHPLFKILLEKTYDKFGFQQSNGLVVPCTVSTFQEVIDGVECNHGNFDLSSILYEL* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00680 127 Pfam Auxin responsive protein 10 108 IPR003676 GO:0009733
Pte13g00680 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00680 Pte-Chr13 5462723 5464459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00680 49 122 Calmodulin-binding Proteins AT3G43120 47.297 4.10e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00680 K14488 - gmx:100782364 152.91