Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00653 ATGGAGGATCATAATCTACATCACTTTCAGGAACAGCAGCAATATGGCATGGCCGAGCTCAGGCACCTCATGAATGCAACAAGGTCGCCTCCTTTCCAAGCTTTGGAGTTGGGGCCAGCACAACCCACTCCAGACCTATTATCGACTCACCGGAATTTAAGCCTAAACCCCACTATCCATTACCACCAACATCAGCAACACTTGGAGATGTTGATGTTTGGCCGTCAAGTGGCCGATGTAATGCCTCTGGGGCCAATGGTTCCTACTACTGCAACGGCTGCCGCCGCCGCCGCCGCCGCCACTAATCCCAGCATTACTGACCCCGTTCCTATCACCAGAACCAGTGCTTCGAGTCCTTCATTTAGTGGCTTCGAGGTCGACACTAATAGCTGCCTCGGAGGAGATGCGTACTCAGGAAGATGGCCAAGGCAGGAAACTCTGATTCTCCTTGAGATCAGATCGCGGCTTGACCCTAAATTTAAAGAGGCTAATCAAAAGGGTCCCTTATGGGATGAAGTTTCAAGGATCATGTCTGAAGAACACGGTTATCAAAGGAGTGGAAAGAAGTGCAGGGAGAAGTTTGAGAACTTGTATAAATATTACAAGAAGACCAAAGAAGGCAAGGTAGGAAGACAGGATGGGAAACATTACAGGTTCTTTCGCCAACTGGATGCCATTTACGGAGGAAGCAGCAGCATTACTGCTCCAGGCCCAGAAAGCAATTTCATTGGAAGCAGTTTTCTCCTTCAAGGAGCAACCAGCAGTATAGCCCCATCCCAAAGAAATCAAGATAACTTCGAGTCGACTATCAAGCATAGTCACAGCCTAAGCCTGACGAACACCACTGACTTTGATACATCTTCATCTGACATGAATGAGTTAAGCAATGAGGCCTTAATGGAGCATGACTCCTTGGACAAGAGAAGAAATTTAAAGAGTTCTCGAAGGGGCTGGCAGGCCAAGATAAGATACTTCATTGACTCGCAGATGAAGAAGCTGATGGAGAGACAAGAAGCCTGGTTGGAGCGGTTGGTGAAGACTGTCGAAGAGAAGGAGAAAGAGAGAATCTCAAAGGAGGAAGAGTGGAGGAAACAAGAGGCAGCCAGGTTAGAAAGGGCGCATAAATTTCAGGCCAGAGAGAGAGCGTGGATTAAATCTAGGGATGCGGCCTTGGTAGAGGCTTTACAAAAGTTAAGTGGACAAGAAAGGAACACACTGTCTCCCCACGTGGATTCAGTGGCTGCTGAGATTCAAAACCAAAGTGAGAACCAGAACGGGGATAGAAGTGAAGTACATAACGGCAATGCTAGATCCTTTGCTGAAAGCTGGCTGGAATCTGAGGTCGCAAGGCTTATGCAGTTGAGATATGAAATGGAGTACAAGTTTCAACAAAGTGGGAGGTCTGAAGACAATGATCTATGGGAGGAAGTGGCAGCGAAAATGGCTTGCTTAGGTTATGAAAAAAAGAGTGCTTTAATATGCAAGGAGAAATGGGAAAGCATTCAAATGTCTACCCGGAATAACAAGAAGTGGAAGGAAAATACAAACTGCTGTTATTTTGAGAATATCGGTCAACCCTTTTTATACAGTCAAGATAGTGCCTATTGTGAAATGAACAAAGGAAAAGAACAAGAAACAGCACAATTTTGCGTTAATGAAGGTGGTTCACATTCAAATTCAAATGCTGGAAATGCTTCATCTGATAGCTGTTACCGGTTAGTAATTCCTGACGAGGGAGAGAGCTTATGGAAAAACCATATTATGAAGCTCAACAAGCTAGGAAATCAAAATCAGTGA 1797 0.4541 MEDHNLHHFQEQQQYGMAELRHLMNATRSPPFQALELGPAQPTPDLLSTHRNLSLNPTIHYHQHQQHLEMLMFGRQVADVMPLGPMVPTTATAAAAAAAATNPSITDPVPITRTSASSPSFSGFEVDTNSCLGGDAYSGRWPRQETLILLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKVGRQDGKHYRFFRQLDAIYGGSSSITAPGPESNFIGSSFLLQGATSSIAPSQRNQDNFESTIKHSHSLSLTNTTDFDTSSSDMNELSNEALMEHDSLDKRRNLKSSRRGWQAKIRYFIDSQMKKLMERQEAWLERLVKTVEEKEKERISKEEEWRKQEAARLERAHKFQARERAWIKSRDAALVEALQKLSGQERNTLSPHVDSVAAEIQNQSENQNGDRSEVHNGNARSFAESWLESEVARLMQLRYEMEYKFQQSGRSEDNDLWEEVAAKMACLGYEKKSALICKEKWESIQMSTRNNKKWKENTNCCYFENIGQPFLYSQDSAYCEMNKGKEQETAQFCVNEGGSHSNSNAGNASSDSCYRLVIPDEGESLWKNHIMKLNKLGNQNQ* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00653 598 CDD GT1 443 501 - -
Pte13g00653 598 SMART sant 137 200 IPR001005 -
Pte13g00653 598 SMART sant 358 504 IPR001005 -
Pte13g00653 598 ProSiteProfiles Myb-like domain profile. 133 198 IPR001005 -
Pte13g00653 598 CDD GT1 140 205 - -
Pte13g00653 598 Gene3D - 443 507 - -
Pte13g00653 598 Gene3D - 141 203 - -
Pte13g00653 598 PANTHER FI21293P1 113 557 - -
Pte13g00653 598 ProSiteProfiles Myb-like domain profile. 442 502 IPR001005 -
Pte13g00653 598 Pfam Myb/SANT-like DNA-binding domain 140 226 IPR044822 -
Pte13g00653 598 Pfam Myb/SANT-like DNA-binding domain 442 523 IPR044822 -
Pte13g00653 598 Coils Coil 334 361 - -
Pte13g00653 598 FunFam trihelix transcription factor PTL-like 141 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00653 Pte-Chr13 5130704 5133350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00653 140 596 Trihelix Transcription Factor Family AT5G03680 45.621 2.34e-124 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte13g00653 Myb_DNA-bind_4 2.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00653 - - qsa:O6P43_009526 577.785