Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g00651 | ATGGACAGCTCTCGTCGATCTTTCGATAGATCAAGAGAACCTGGATTGATAAAGAAACCTCGATTGAATGATGACGTTAATGGCCGACCTTTTCCGCAGCGGCCTTTACCGTCCGCGGCGAATGCTAGGTTGAGAGCAATTCAAAGAGATTCCGAAGGTATTGATGCTGGACGTGGCGGCAGAGCAGGGGGAGAAGGATATCACCCTCAGCCACCGCAGCATCAAGAGCTTATTGTACAGTATAGAAATGCTCTAGCTGAGCTGACATTTAATTCAAAACCTATCATTACCAACTTGACAATAATCGCTGGCGAGAATCAATATGCTGCGAAAGATATCGCTGCTATGGTTTGCACTAATATATTAGAGGTTCCCAGCGACCAAAAGTTGCCATCTCTCTATCTTCTAGACAGTATTGTAAAGAATATTGGGAGTGATTATATAAAATATTTTGCTGCAAGATTGCCAGAGGTATACTGCAAGGCATTCAAGCTAGTAGATCCTTCTGTTCATGCTAGTTTGAGGCATTTGTTTGGAACATGGAAGGGTGTCTTTCCTCCTCAGCCACTGCAGATGATTGAGAAAGAACTTGGTTTCAATCAAACTGTTAATGGTTCAGCTTCAGGAGTTACCACAATGAGGACTAATCCTCAGACACAACGCCCTCCTCACAGTATCCATGTGAATCCTAAATATTTAGAAAGACAACGACTTCAACAGGCTAGCAAAGTAAAGGGAGCTGCTAACGATGTGGCAGAGCTTAGTGGAAGGACATCTGAGGACGCCGAGAGGCTTGCTAGAACAGTGAGTATGAATGCTGGACGATCAATGATAGATCCAAATGTTAAGAATCATAATATTCAACCTTCTCACGAAAATGTGATTACTGAATCTATTCATGAGAAGGGTTCCACTTTTCCTTATGGTGGCAATGAATATGTTTCTGGGACTTCGGCTTCAGGAATTGGAAGAAGTACCGTTAGAAGTACTGAGATTGGACGTGACAAACTTTGGTATAAAGCAGGAAGTGGCAATGCAGACACATCTAGTCAAAGAAATGGCCTCAAGATCAAGCATGGGTTTCCAAATTTAGAAGCACATAAACCTTCAAATGTCACTTCTCGTATTAATGCTACTCAAAACTTCTCAAAATTAAATACAAGTGGTCTATCAAATAGCTGGAAAAACTCTGAAGAAGAAGAGTTCTTGTGGGATAACATGAATTCTGGACTGAGTGATCATGGCGTCTCTGCTATTTCCAATACATTACCTAAAGATCATTGGACTCCAGACGATGAGGATGATGATGAAAATTTGGAAATTGTAAACCTTCAGAAAGGGAACACCAAAACTGATGTAGGATCCAGAGTTGCTAGAGGAAAATCCACTGATCAGCAACAACTAATGACTCTCACGCGTTATGCGGAGTCGCCTTGGACATCACAGGATACTCACCTAGGTCACACAGGAACGTATTCATCAACTCTTAGTGGTAAGATTGGAAGTAAATCCCATATAAATTCTTCACACTCTGGAGGTTCACGAGTTGGGTCACTATCAAATTCATACACTGTGTCTTCCGGGGTCGTGGGGCCACGCCAGTCTGGTGGATCTGCATTGCCATCTGAGCAATCTCCTGTGCATCAGCATCCTCAATCACCTACATTGACAGGACGTGCTTTCCAGCCTCAGTTACGAAATTCGAATGGGAAAGAGCGTCTTTCATTTTCCAAAACATCTCAATTGTCTGCAGGGCTAGAAAATAAAAATACACAGGACAGGTCATTGACTTCACCTTCTAATCTGTCGGTGGGTAGTTGGCAAAAATCAAATTTCAAAGACTTGAAAATTCCAATGCTTTCGAAAGCTCCAGTACAAAAAAGACAGCATGATTCATCTTCACAGCAACTAGTAGAGTCCAAACAGATAGAGTTTTCTGATATGAAGGAGAAGGCCTCCATGTCTCAAGTTTCAGATCATGAAAATCAGCCAACACCAGAGAAATCGGCATCAGAAATTTCAAGTTCCTTACATAATGAAACTTCAGAGCCTTCAACTGCCAGTAGTCTGTTAGCTGCAGTCATGAAGAGTGGAATTTTGTCCAAAACTTCGATTACTAGTAGTCCACCTATGAGTCTTCTAGATATAGGGAAGCTGCCATCACAATCAGGACGTTGCACTCAGCCTTTAAGTAGGTCTCCTTCCCAAGATACTTCAGTTCCTATGGTTTCCTTACCATCTCCATTACCGTCTTCCAATAATGCCAACACTGTTTTCCCAAAAAAATGTCAAAAGAAGGAAGACCATTTATCAGTAGCACCCGCTCCACCTCCTCCTTCTGCCGTAAGTAGTAGCTTTGTTCAAACCTCGAATGTTCTGAACAATTCATCTAATCCAATTTCAAACATTTTGAGCTCATTAGTTGCCAAGGGTTTAATATCTGCACAGGCAGAATCAAAAAATGTTGCACAATCTGATATGCTTTCTCGACTACAAGATCATAATGAAGGTGTCTGTTCTAGTACCCCTCAGCCAGTTCCTCAAGTTCCTACTCCTGCGGCTATCCCTTCATCAATGTCCAAGGACATGTTATCCTCTCAGGAACAGGATTCAAAAAGCTCTGCTTTCTGCTCTCAATCTAGCCCGACAAAAATAAAAAGCCTCATTGGTTTTGAGTTTAAATCAGATGTTCTACGAGAAGTCCATTCTCCTGTCCTCAGAGAGCTATATGACGATTTTTTTAGTTGCAGCATTTGCGGCCTTAGACTGAAATTTCGGGACCAACTGGACAGACACTTGGAGTGGCATGCTTTGAGTGTGCCTGAAGAAAACGGCGAGGTTAAGAAATCAAGAAGCTGGTATGCAAACTCTAGTGATTGGGTTTCTGGGAAATCTCAGTTTCCTTTAGAGTCTGAGTTTCCTTTTCTCGATCAATTGGGCCAGCTGGTGGATAAAGTGGAGCCAATGGTTCTGGCAGATGAAAATCAGTGCATCTGTCCATTGTGTGGTGAACTATTTGAAGATTTCTACTGTCAAGAAAGGGAGGAATGGATGTTCAAGGGAGCTATTTACATGGCTATGAAGTCTGGTTTGCACGAGGACTCCACTGGTCCAATTGTACATGGGAAGTGTGTATCTGAAAGTTCCACCAATGACTTGGGAATGTTCAACGGAATCAAAATGGAGGAGGACATACAAATAGGGTGA | 3207 | 0.4228 | MDSSRRSFDRSREPGLIKKPRLNDDVNGRPFPQRPLPSAANARLRAIQRDSEGIDAGRGGRAGGEGYHPQPPQHQELIVQYRNALAELTFNSKPIITNLTIIAGENQYAAKDIAAMVCTNILEVPSDQKLPSLYLLDSIVKNIGSDYIKYFAARLPEVYCKAFKLVDPSVHASLRHLFGTWKGVFPPQPLQMIEKELGFNQTVNGSASGVTTMRTNPQTQRPPHSIHVNPKYLERQRLQQASKVKGAANDVAELSGRTSEDAERLARTVSMNAGRSMIDPNVKNHNIQPSHENVITESIHEKGSTFPYGGNEYVSGTSASGIGRSTVRSTEIGRDKLWYKAGSGNADTSSQRNGLKIKHGFPNLEAHKPSNVTSRINATQNFSKLNTSGLSNSWKNSEEEEFLWDNMNSGLSDHGVSAISNTLPKDHWTPDDEDDDENLEIVNLQKGNTKTDVGSRVARGKSTDQQQLMTLTRYAESPWTSQDTHLGHTGTYSSTLSGKIGSKSHINSSHSGGSRVGSLSNSYTVSSGVVGPRQSGGSALPSEQSPVHQHPQSPTLTGRAFQPQLRNSNGKERLSFSKTSQLSAGLENKNTQDRSLTSPSNLSVGSWQKSNFKDLKIPMLSKAPVQKRQHDSSSQQLVESKQIEFSDMKEKASMSQVSDHENQPTPEKSASEISSSLHNETSEPSTASSLLAAVMKSGILSKTSITSSPPMSLLDIGKLPSQSGRCTQPLSRSPSQDTSVPMVSLPSPLPSSNNANTVFPKKCQKKEDHLSVAPAPPPPSAVSSSFVQTSNVLNNSSNPISNILSSLVAKGLISAQAESKNVAQSDMLSRLQDHNEGVCSSTPQPVPQVPTPAAIPSSMSKDMLSSQEQDSKSSAFCSQSSPTKIKSLIGFEFKSDVLREVHSPVLRELYDDFFSCSICGLRLKFRDQLDRHLEWHALSVPEENGEVKKSRSWYANSSDWVSGKSQFPLESEFPFLDQLGQLVDKVEPMVLADENQCICPLCGELFEDFYCQEREEWMFKGAIYMAMKSGLHEDSTGPIVHGKCVSESSTNDLGMFNGIKMEEDIQIG* | 1069 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g00651 | 1068 | SMART | 558neu5 | 76 | 198 | IPR006569 | - | |
Pte13g00651 | 1068 | FunFam | polyadenylation and cleavage factor homolog 4 | 70 | 198 | - | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 657 | 684 | - | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 833 | 878 | - | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 495 | 605 | - | - | |
Pte13g00651 | 1068 | SUPERFAMILY | ENTH/VHS domain | 73 | 195 | IPR008942 | - | |
Pte13g00651 | 1068 | Gene3D | - | 69 | 198 | IPR008942 | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 646 | 684 | - | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 704 | 785 | - | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Pte13g00651 | 1068 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 916 | 936 | IPR013087 | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 415 | 435 | - | - | |
Pte13g00651 | 1068 | ProSiteProfiles | CID domain profile. | 73 | 201 | IPR006569 | - | |
Pte13g00651 | 1068 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 76 | 1054 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 853 | 878 | - | - | |
Pte13g00651 | 1068 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 914 | 941 | IPR013087 | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Pte13g00651 | 1068 | CDD | CID_Pcf11 | 80 | 197 | IPR047415 | - | |
Pte13g00651 | 1068 | Pfam | CID domain | 83 | 191 | IPR006569 | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 446 | 465 | - | - | |
Pte13g00651 | 1068 | MobiDBLite | consensus disorder prediction | 721 | 760 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g00651 | Pte-Chr13 | 5108872 | 5114776 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g00651 | 64 | 411 | C2H2 Transcription Factor Family | AT4G04885 | 36.565 | 6.54e-52 | 194 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pte13g00651 | CID | 1.3e-11 | CL0020 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g00651 | K14400 | - | qsa:O6P43_009520 | 868.996 |