Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00642 ATGTCTGAGACTCTTTTTGATCTCCCAATTGGGGCTAATGAGTCTGATGATGTTCATGCTCCTCGTCCTCTTGATGTGACTATGGAGGATGTTGATATATTTCTGATGATGTTCAATTCCCACCTTTGGCAGAGACTTTGCCTTCTTCCTCTAAGAGGATTGACAGTGAGGTTGCGTGGAATCTCGGATTTATTTGCATTGCAGATTAGGCGGTCATCCTATCACAATGTTGTGAGAGTGGCAGAGATTCAAAAGGTTTTAGATATCAGTGGAGTTCAGACTTATGTTATTAACAGTGCCAGAGTTCTTTTTTTGAATGAGAGACCTCAACCTAAGACCAATCTTACTATTGGAAAAGCCACTTCACATTTTTGTGAAATCTGTGCTAGAAGTCTCTTAGACCCGTTTCGGTTTTGTTCTTTGGGGTGCAAGCTGGTAGTAATAAAGGAGAATGGCAATGGGAGCTTTATGATGACAAGTGCAAAGCAAGGCGAAGGAGTAGGAAGAAGAGAAGGAATGCCAAGGAGATTGGCATCAAAAGAAGCAGAATCAGTGGTAGAAGAAGCTGAAGGATTGCGTGAAGGGATGCAAAAACAAGTGCACCGAAGCACGCCATATACACCACCACTGCGCCCTCATTCAAACACAAGGAGAAGGAAGGGCATACCTCACAGGTCACCTTTAGGGGCCTAA 693 0.4358 MSETLFDLPIGANESDDVHAPRPLDVTMEDVDIFLMMFNSHLWQRLCLLPLRGLTVRLRGISDLFALQIRRSSYHNVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKTNLTIGKATSHFCEICARSLLDPFRFCSLGCKLVVIKENGNGSFMMTSAKQGEGVGRREGMPRRLASKEAESVVEEAEGLREGMQKQVHRSTPYTPPLRPHSNTRRRKGIPHRSPLGA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00642 230 Pfam PLATZ transcription factor 70 145 IPR006734 -
Pte13g00642 230 Coils Coil 179 199 - -
Pte13g00642 230 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 64 228 - -
Pte13g00642 230 MobiDBLite consensus disorder prediction 168 197 - -
Pte13g00642 230 MobiDBLite consensus disorder prediction 159 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00642 Pte-Chr13 4994904 5003653 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pte13g00642 PLATZ 3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00642 - - qsa:O6P43_000399 204.142