Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00631 ATGGTTCTCAAGACAGAGTTGTGTCGTTTCAGTGGGCAAAAGATATATCCCGGGAAAGGTATCAGATTTATCCGTTCTGATTCTCAGGTTTTCCTCTTTGCAAACTCAAAATGCAAGAGGTATTTCCACAATCGACTGAAGCCATCCAAGCTCACATGGACAGCCATGTATAGGAAGCAACACAAGAAGGACATTGCACAAGAGGCTGTGAAGAAGAGGCGTCGTGCCACCAAGAAGCCTTATTCTAGGTCTATTGTTGGTGCAACAATGGAAGTGATTCAAAAGAGAAGAACTGAGAAGCCTGAGGTTCGTGATGCTGCTAGGGAAGCTGCTCTCCGTGAAATCAAGGAGAGGATCAAGAAGACAAAGGATGAGAAAAAGGCTAAGAAGGCAGAAGTGGTGGCCAAGTCACAGAAAATACAAGGGAAAGGAAATGTTCCCAAGGGAGGTTCCGCACCTAAAGGCCCCAAGCTTGGTGGAGGCGGTGGGAAACGTTGA 498 0.4659 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATMEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVVAKSQKIQGKGNVPKGGSAPKGPKLGGGGGKR* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00631 165 MobiDBLite consensus disorder prediction 119 136 - -
Pte13g00631 165 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Pte13g00631 165 Coils Coil 112 132 - -
Pte13g00631 165 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Pte13g00631 165 Gene3D - 69 138 - -
Pte13g00631 165 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Pte13g00631 165 FunFam 60S ribosomal protein L24 3 64 - -
Pte13g00631 165 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Pte13g00631 165 PANTHER 60S RIBOSOMAL PROTEIN L24 4 142 IPR000988 -
Pte13g00631 165 MobiDBLite consensus disorder prediction 119 165 - -
Pte13g00631 165 SMART 4TRASH 8 46 IPR011017 -
Pte13g00631 165 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Pte13g00631 165 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00631 Pte-Chr13 4892512 4894307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00631 1 158 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.443 1.30e-87 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00631 K02896 - mnt:21385853 244.588