Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00619 ATGCCGATTCAAAACATAGCTGTAGGCAGATACGAGGAGGCTTATCACCCAGATGCCTTGAAACAAGGTCTAGCTGAGTTCATCTCAACCTTAATCTTTGTCTTTGCCGGCTCTGGTTCCGGTATGGCCTTCAACAAGCTCACTCATGATGGAGCCGCCAGCCCTGCCGGCCTTATCTCTGCAGCGATTGCTCATGCCTTTGCGCTTTTCGTAGCTGTCTCCATCGGTGCCAATATCTCAGGTGGTCACGTTAACCCAGCTGTCACCTTCGGTGCCTTCATCGGTGGTAACATCACCTTCTTCCGTGGCCTTCTCTACATCATCGCTCAGCTTCTCGGTTCCATCGTTGCATCCTTGCTACTGAAGTTCGTCACCGGTGGCCTGGCAGTACCAGCATTTGCACTCTCTTCTGGGGTGAGTGTATGGGAGGGATTGGTGTTTGAGATTGTGATGACATTTGGACTGGTGTACACCGTGTATGCTACAGCCGTTGACCCAAAGAGGGGTAATTTGGGAATAATCGCACCCATTGCTATTGGTTTCATAGTTGGAGCCAATATCTTGGCGGGTGGGGCATTCTCTGGAGCATCCATGAACCCGGCAGTGTCATTCGGACCAGCTGTTGTGAGCTGGAGCTGGGACAACCACTGGGTGTACTGGCTTGGACCTCTGATCGGGGGTGGACTTGCTGGTGTCGTGTATGAGTTATTCTTCATCAGCCACTCCCACGAGCAGTTGCCAACTACTGAATACTAA 756 0.5172 MPIQNIAVGRYEEAYHPDALKQGLAEFISTLIFVFAGSGSGMAFNKLTHDGAASPAGLISAAIAHAFALFVAVSIGANISGGHVNPAVTFGAFIGGNITFFRGLLYIIAQLLGSIVASLLLKFVTGGLAVPAFALSSGVSVWEGLVFEIVMTFGLVYTVYATAVDPKRGNLGIIAPIAIGFIVGANILAGGAFSGASMNPAVSFGPAVVSWSWDNHWVYWLGPLIGGGLAGVVYELFFISHSHEQLPTTEY* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00619 251 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Pte13g00619 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pte13g00619 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g00619 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g00619 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g00619 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g00619 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g00619 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g00619 251 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g00619 251 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte13g00619 251 PANTHER AQUAPORIN-8 6 246 IPR034294 -
Pte13g00619 251 SUPERFAMILY Aquaporin-like 12 246 IPR023271 -
Pte13g00619 251 FunFam Probable aquaporin TIP1-1 4 251 - -
Pte13g00619 251 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00619 Pte-Chr13 4794376 4796357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00619 1 252 Major Intrinsic Protein MIP AT2G36830 79.762 2.60e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00619 K09873 - qsa:O6P43_010237 428.713