Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00610 ATGCCCTCCAATATAACCTCCGTTAAAGTCTCTTCCAATGGAGCTTGGGAAGGTGATAACCCCTTGGACTATGCCTTCCCACTCCTAATAGTCCAAACCACCATAATCCTTGTTCTCAGTCGCTTCCTGGCTTTCATTCTCAAACCCCTTCGCCAACCCAAAGTCATAGCTGAGATTGTGGGTGGAATTTTGTTAGGGCCATCAGCTATTGGAAGAAACCATAAGTATATGCAAAGGATTTTCCCACCATGGAGTACTCCAATACTTGAATCCGTCGCTAGTATTGGCCTTCTGTTCTTTCTATTTCTCGTAGGCCTTGAACTTGACCTGACCTCCATTCGTCGAAGTGGCAGACGAGCTTTCGGGATAGCACTCGCCGGAATTTCCCTACCATTCGTTTCTGGAATTGGAGTGGCAATAGTGTTGAGGAAAACAGTTGAAGGAGCTGACAAAGTTGGCTTCGCCCAATTCCTTGTCTTCATGGGTGTGGCGCTCTCCATCACAGCTTTTCCTGTGCTGGCACGCATCCTAGCGGAGCTCAAACTCTTGACCACGCGAGTTGGAGAGACAGCTATGGCCGCCGCAGCATTTAACGACGTCGCCGCATGGATCTTGCTGGCGCTTGCTATTGCTCTCGCTGGCGACGGAGAGGGTGGGCACCGCAAGAGCCCCTTGATCTCGATCTGGGTACTCCTCTCAGGAGTTGCTTTTGTCGCTTTCATGATGGTTGTGATCCGACCCGCTATGAAATGGGTGGGAAGACGATGCTCGTCCGAACACGACGTCGTAGATGAGGTTTATATATGTCTGACGTTAGCTGGAGTCATGGTTTCTGGGTTCTTGACCGATTTGATAGGGATCCACTCTATCTTCGGTGCCTTCGTTTTCGGGTTGACTATTCCCAAAGGAGATTTTGCTGACAGGTTGATAGAGAGGATAGAGGACTTTGTCTCTGGCTTACTCCTTCCACTGTACTTTGCTTCAAGTGGGTTGAAAACCAACGTGGCTAAAATTGAAGGTGGAAAGTCATGGGGGCTTTTGGTTTTGGTCATAACTACAGCTTGTGCTGGCAAGATCCTTGGGACTTTTATTGTGTCTTTGATGTTAATGATTCCCGCAAGGGAGTCTTTGACACTTGGAGTGCTCATGAATACCAAAGGTTTAGTGGAGCTCATTGTGCTCAACATTGGGAAGGAGAAAAAGGTTCTCAATGACGAGATTTTTGCCATTTTGGTTCTGATGGCTCTCGTCACAACCTTCATCACAACCCCAACAGTCATGGCTATATACAAGCCTGCCCGCGGCATTTCCATCCCAACTCACCGCAAGCTACGTGACCTCACCACCACGGACAAGTCCGCCGACGACCTGCGGATTCTAGCGTGTGTCCATGGCCCAGGCAATGTACCTTCACTGATCAGGCTCATTGAATCAACACGAAGCACTAGGAAGTATTTCCTCAAGCTATTCGTAATGCACCTGGTTGAACTAACCGAACGCTCTTCCTCCATCATCTTGGTCCGACGTGTTCGAAAGGATGGCTTTCCCTTCTTCAAACGTAACCGTCGCGGCGAATGGCATGACAGCATAGGTGGGGCCTTCCAGGCGTATAGCCAACTGGGTCGGGTCTCTGTCCGACCCACGACAGCCATCTCATCCTTGTCTACTATGCACGAGGATATATGTCACGTGGCGGAAGAAAAGCGGGTGGCCATGATTATCTTGCCTTTTCACAAACAGTGGAGAATGGAAATCGACGGCGATGAGGCCCATGAGTTCGTAGAAAATATGGGCAACGGCTGGAGAGGAGTCACTCAAAGGGTGCTTAAGTATGCACCGTGCTCCGTGGCTATTCTTGTGGACCGTGGATTTGGAAATGGGTCTCAGACTTCTAAGCCCAATTCAACTATAACACAACGCGTCTGTATTCTTTTCTTTGGTGGGCCTGATGACCGTGAGGCCTTAGAATTGGGCGGGAGGATGACTGAGCATCCGGCAGTTAATGTGACAGTTGTAAGGTTTGTTGAGAATGATGGACCGAGGAGTGATGACGTCATGTTACGGCCCATTCCAGCAGAAAGCAGCGAGAACACGAACAACTATACTTTCTCTGTCTCTACTGCCCATATGGATAGAGAGAAAGAAAAGGAACTAGATGAAATTGCAGTGGCAGAGTTCAGGAGCAAGTGGGATGGAATGACAGTGTACAAAGAGAAGGTGGCTAGCAACATTGTGGAGGGAGTGTTGGCAATAGGGCGAAGTGGTGACTATGATCTTATAGTTGTAGGAAAAGGAAGATTTCCGTCGAGTAGGGTGGCGGAATTGGCCGAGCGTCATGCAGATCACTCTGAGTTGGGTCCAATTGGAGACATTTTGGCATCATCAGGACATGGAGTGATCTGTTCAGTGCTTGTGATTCAACAGCATGATGTCGCACACAGAGAGGAAGTCCCTATGACCAAGGTGCAAGTGCAAGGCAGGTTAGACGATTTGAAAGCCGTTGAGTCGTCTGGTAACAGTGATCATTTGGAGTCCACGGATAATATTGTGTAG 2553 0.4892 MPSNITSVKVSSNGAWEGDNPLDYAFPLLIVQTTIILVLSRFLAFILKPLRQPKVIAEIVGGILLGPSAIGRNHKYMQRIFPPWSTPILESVASIGLLFFLFLVGLELDLTSIRRSGRRAFGIALAGISLPFVSGIGVAIVLRKTVEGADKVGFAQFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVAAWILLALAIALAGDGEGGHRKSPLISIWVLLSGVAFVAFMMVVIRPAMKWVGRRCSSEHDVVDEVYICLTLAGVMVSGFLTDLIGIHSIFGAFVFGLTIPKGDFADRLIERIEDFVSGLLLPLYFASSGLKTNVAKIEGGKSWGLLVLVITTACAGKILGTFIVSLMLMIPARESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALVTTFITTPTVMAIYKPARGISIPTHRKLRDLTTTDKSADDLRILACVHGPGNVPSLIRLIESTRSTRKYFLKLFVMHLVELTERSSSIILVRRVRKDGFPFFKRNRRGEWHDSIGGAFQAYSQLGRVSVRPTTAISSLSTMHEDICHVAEEKRVAMIILPFHKQWRMEIDGDEAHEFVENMGNGWRGVTQRVLKYAPCSVAILVDRGFGNGSQTSKPNSTITQRVCILFFGGPDDREALELGGRMTEHPAVNVTVVRFVENDGPRSDDVMLRPIPAESSENTNNYTFSVSTAHMDREKEKELDEIAVAEFRSKWDGMTVYKEKVASNIVEGVLAIGRSGDYDLIVVGKGRFPSSRVAELAERHADHSELGPIGDILASSGHGVICSVLVIQQHDVAHREEVPMTKVQVQGRLDDLKAVESSGNSDHLESTDNIV* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00610 850 FunFam Cation/H(+) antiporter 15 28 437 - -
Pte13g00610 850 Gene3D - 518 786 - -
Pte13g00610 850 Pfam Sodium/hydrogen exchanger family 35 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pte13g00610 850 Gene3D - 28 434 IPR038770 -
Pte13g00610 850 PANTHER CATION/H + ANTIPORTER 8 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00610 Pte-Chr13 4672064 4676624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00610 76 828 Antiporter Super Family AT3G53720 68.449 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00610 K26731 - qsa:O6P43_010405 1294.26