LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte13g00609	ATGGCGGCATCGAGGAGGCTACGAGATCTTCAATCTCAACCGGCTAACAAAGTATGTGTCGATTGCGCTCAGAAGAACCCACAATGGGCTTCTGTTTCATACGGCGTCTTCATGTGCTTAGAATGTTCCGGCAAGCATCGGGGTCTCGGCGTGCACATCTCCTTCGTCCGATCCGTTACCATGGACTCTTGGTCCGAGATCCAGGTTAAGAAGATGGAATCTGGCGGTAATGACAAGCTCAACGCTTTCCTCTCACAGTATGGGATACCCAAAGAAACGGACATCGTTGCCAAGTACAATAGTACCGCTGCCAGTATCTACAGGGATAGAATTCAAGCTCTAGCTGAAGGTCGAACATGGCGGGATCCACCTGTTGTCAAGGAAAATATGGGCGGGAGCAATAGAAAGCCACCTTTGTCACACAGCAGCGGTGGTGGTGGATATAATAGTATTAGCAAAAGTAGTGGAGGATGGGATAGTTGGGATAACGACTACGATGGATCTAGATCTACTTCTAGTGATATAAGGAGAAACCAATCCACTGGAAATATGAGAGGTTCGAATGGTGTGGGTGGAGCACCAGTGAGGTCTAGATCCACAGAGGACATTTATACGCGGTCTCAGTTGGTGGCTTCTGCTGCTAATAAAGAGAGCTTTTTTGCTAGGAAGATGTCTGAGAATGAGTCCAGACCTGAAGGGCTTCCGCCTTCACAAGGAGGCAAGTACGTTGGATTCGGATCAAGTCCTGCACCTGCGCAGAGAAATAATAATGCACCAACTGATTATTTCTCTGTTGTTTCTCAGGGATTAGGGAAATTGTCATTGGTTGCTGCCTCGGCAGCTCACTCCGCTGCTAATGTTGTCCAGGCAGGGACTAAAGAGATCACTACCAAGGTAAAGGAAGGTGGGTACGATCACAAGGTCCATGAAACTGTCAACGTGGTTACTGAAAGGACAACTGAGATTGGACAGAGGACTTGGGGTTTTATGAAAGGTGTTATGGCTGTGGCTACCCAAAAGGTTGAGGAGTATTCGAAAGAAGGTGGCAGGAACTGGGGTGGTGATAACTGGCAGCGGAATGAAAATGGGAAGAATGGTCATTATCAAGAGTTCAATCGTGATAACGAAGCTTGGAATTCTTCTGGAGGAGGGAAGTCTTCCTCAGGCGGGCAATTTAATTCTTTCAGCTCTAGCTCGTGGGATGATTGGGACCAACAACATAGTAGGAAGCAAGAACCGGCAAAAGCAACAGCATCTAACAAACAGTCTTCGTCTGGCAGGGAGGTCAAGTCTTTCAACTCTAGCTCGTGGGATGATTGGGACCAACAAGATACTAGGAAGCAAGAACCTGCAGAAGCAACAACATCTAACAAAAATGATGGTTGGGCTGGCTGGGATGATGCCAAAGAAGATGGATATGATCATTTCTACAACAGTACCCCTGATAAGAAAACTGTCCATCACAATGGGAAATCAGATGGAACATGGACTGGTGGAGGATTTCATTAA	1509	0.4698	MAASRRLRDLQSQPANKVCVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQVKKMESGGNDKLNAFLSQYGIPKETDIVAKYNSTAASIYRDRIQALAEGRTWRDPPVVKENMGGSNRKPPLSHSSGGGGYNSISKSSGGWDSWDNDYDGSRSTSSDIRRNQSTGNMRGSNGVGGAPVRSRSTEDIYTRSQLVASAANKESFFARKMSENESRPEGLPPSQGGKYVGFGSSPAPAQRNNNAPTDYFSVVSQGLGKLSLVAASAAHSAANVVQAGTKEITTKVKEGGYDHKVHETVNVVTERTTEIGQRTWGFMKGVMAVATQKVEEYSKEGGRNWGGDNWQRNENGKNGHYQEFNRDNEAWNSSGGGKSSSGGQFNSFSSSSWDDWDQQHSRKQEPAKATASNKQSSSGREVKSFNSSSWDDWDQQDTRKQEPAEATTSNKNDGWAGWDDAKEDGYDHFYNSTPDKKTVHHNGKSDGTWTGGGFH*	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte13g00609	502	MobiDBLite	consensus disorder prediction	412	439	-	-
	Pte13g00609	502	ProSiteProfiles	ARF GTPase-activating proteins domain profile.	4	120	IPR001164	GO:0005096
	Pte13g00609	502	SMART	arf_gap_3	1	120	IPR001164	GO:0005096
	Pte13g00609	502	Pfam	Putative GTPase activating protein for Arf	5	100	IPR001164	GO:0005096
	Pte13g00609	502	MobiDBLite	consensus disorder prediction	135	187	-	-
	Pte13g00609	502	PANTHER	ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED	1	421	IPR044519	GO:0005096\|GO:0016192
	Pte13g00609	502	MobiDBLite	consensus disorder prediction	345	502	-	-
	Pte13g00609	502	MobiDBLite	consensus disorder prediction	224	255	-	-
	Pte13g00609	502	SUPERFAMILY	ArfGap/RecO-like zinc finger	5	117	IPR037278	-
	Pte13g00609	502	PRINTS	HIV Rev interacting protein signature	16	35	IPR001164	GO:0005096
	Pte13g00609	502	PRINTS	HIV Rev interacting protein signature	35	52	IPR001164	GO:0005096
	Pte13g00609	502	PRINTS	HIV Rev interacting protein signature	56	77	IPR001164	GO:0005096
	Pte13g00609	502	Gene3D	Arf GTPase activating protein	1	131	IPR038508	-
	Pte13g00609	502	CDD	ArfGap_ArfGap1	3	117	-	-
	Pte13g00609	502	MobiDBLite	consensus disorder prediction	372	402	-	-
	Pte13g00609	502	FunFam	ADP-ribosylation factor GTPase-activating protein	1	129	-	-
	Pte13g00609	502	MobiDBLite	consensus disorder prediction	118	200	-	-
	Pte13g00609	502	MobiDBLite	consensus disorder prediction	463	490	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte13g00609	Pte-Chr13	4662886	4671591	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte13g00609	5	87	C2H2 Transcription Factor Family	AT4G05330	52.381	3.40e-23	98.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte13g00609	K12492		-	pvy:116134424	684.871