Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte13g00605 | ATGGCGACGTTTGCTAAACCAGAGAATGCGTTGAAACGAGCTGAAGAATTAATAAATGTTGGACAGAAGCAAGACGCTCTTCAAACCCTTCACGACCTCATCACTTCCAAAAGATATAGAGCGTGGCAAAAGACCCTTGAGAGAATTATGTTCAAATATGTGGAGCTTTGTGTCGAGATGAGGAGAGGTCGTTTTGCCAAGGATGGTCTCATTCAGTATCGAATCACTTGTCAACAAGTGAATGTTAGTTCATTAGAAGAGGTGATCAAGCATTTTATGCATTTAGCAACAGAAAAAGCTGAACAAGCTCGTAGTCAGGCACAGGCCTTAGAAGAAGCTCTTGATGTTGATGATCTGGAAGCTGATAAAAGGCCAGAGGACTTAATGGTGAGTTATGTTAGTGGCGAGAAAGGAAAGGATAGATCTGATAGGGAGCTTGTTACCCCATGGTTTAAGTTCCTATGGGAAACATACAGGACTGTGCTTGAGATCTTACGAAACAACTCAAAGCTGGAAGCTTTATATGCTATGACAGCTCACCGCGCTTTCCAGTTTTGCAAGCAGTATAAGCGAACAACAGAGTTTCGCAGGCTTTGTGAAATAATAAGGAACCATCTGGCTAATCTTAATAAGTATCGAGACCAAAGGGACCGACCTGATCTTACTGCTCCTGATAGCTTGCAACTCTATCTTGATACAAGATTTGAGCAGCTTAAAGTTGCTACAGAACTTCAAATGTGGCAGGAAGCTTTCCGATCTATTGAAGATATTTATGGACTGATGTGCTTGGTCAAGAAGACTCTCAAGCCATCTCTGATGGTTCTTTACTATGCTAAGCTGACAGAAATATTTTGGATATCTAGAAGCTATCTGTATCATGCATATGCTTGGTTCAGGCTCTTCTTGCTGCAGAAAAGTTTTAATAAAAACCTTACCCAGAAGGATTTGCAGTTAATAGCATCGTCAGTTGTTTTGGCTGCACTTTCTGTTTCTCCCTATGATCTTTCTCACGGGGCATCTAATTTGGAGCTTGAGCATGAAAAAGAGAGAAACACAAAGATGGCTAATCTTATGGGATTTAATCTCGAAGCTAAACCTGAGAGCAGAGAAGTGGTACTATGTTTATCTATTGTTTCAAAAGGTGTAATGTCTTGTGCTGCTCAGGAAGTTAAAGATATCTACCATCTTTTAGAACATGAGTTTGTCCCACTTGATCTTGCAGCAAAAGTTCATCCCTTACTGACGAAAACTTCTAAGTTTGGGGGTAAGATATCTTCAGCTGCTTCTGTACCAGATGTCCAATTGTCCCAGTACATTCCGGCCCTTGAGAAACTTGGAACTTTGAGGTTGCTGCAGCAGGTTTCCAAAATTTACCTTAAGATGAAGATTGAGACTCTTTCTGGCATGATTCCATTTTTTGATATTGCTGATGTTGAGAAGATTACTGTAGATGCTGTCAAACATAATTTTGTGCAGTTGAAAGTTGACCATGCAAGGAATTGTGTTGTCTTCTGTGAGAGGAGTCTTGAATCGGATGGCTTATTTGATCAACTGGCAAATCTGGCTCAAGAGTTTAGTGCTGCAAGATCAATGATCTATCCTCCTGTTAAAAAAGCATCAAAAAGTGGTGATATGCTTCCCAATTTGCATGAAACTTTGGAGAAAGAGCACAGAAAACTTCTAGCTCGGAAGTCAGTAATTGAGAAGCGTAAGGAGGATCAAGAAAGGCAACTTCTAGAAATGGAACGTGAGGAGGAAACGAAGAGGTTGAGACTGCGCAAGATAACTGAAGAAGCAGAGCAAAAGCGACTTGCCACTGAGTATGAGCAGCGGAAGAACCAAAGGATTCTCAGAGAAATACAGGAGAAAGAACTGGAAGAAACCCAGGCTGTTTTGGAAGAGCTCAAAAAGAAGGGGAAGAAGCCAGTGATAGAAGGGGATAAGCTGACCAGAGAAACATTGAGGGAATTGGCCTTGAGCGAGCAACTTCGGGAAAAGCAGGAAATGGAAAAGAAAATGCAAAAACTTGCCAAGACAATGGATTATTTGGAGAGAGCAAAAAGAGAGGAGTCCGTTCCTCTGATTGAAGCTGCATATCAACAGCGGTTAGTGGAAGAGAGAAAATTGCATGAGCATGAGCTACAACTAGAGACTGCACTCAGTAAGCAGCGTCATGAGGGAGACTTGAAGGAGAAGGAGAGGCTGGCTCGAATGAAGGACAATAAAGAGATTTTTCAAGAGAGAGTTGTCAGTCAACGCCAATCAGAACTTGACAGATTAAGGGAGGAAAGAGAAGAGCGAATCTCTAGCATTTTACGTTCCAGGAAACTGGAAAGGGAGAAGATGAGAAAATACAAATATTATTTGATGTTGGAAGAAGAGAGGCAAAAGAAATTGCGGGAGGAGGAGGAAGCTCGAAAGCACGAGGAGGCTGAGAGGCGCAGAAGGGAAGAGGCAGAGCGTAAAGCAAAATTGGATGAGATTGCTGAGAAACAGAGGCAAAGGGAGAGAGAACTGGAGGAAAAAGAGAGGCTCAGGAAAGAGGCATTGCTTAAATCTACTACTGAAGCACCAGCAAGGCCCACTGAACCTGCCACTGCTCCAGCAATAGCAGCTGCAGCTCGGCCATTGGAGTCAGGATCTGCTACTGCACCGGCCCCTGGGAAATATGTTCCTAGGTACCGGCGCTCTGAAACTGCTAGCCAGACTCCTCCAGAAACTGATCGATGGGGTAGCAGCAGTGGAAGGCAAGATGATAGAATGCCCCCAGCTGCTGATCGGTGGCGCAGTGATGATCGGAGACCCGCATTTGGTGGTTCAAGGTCATCTTCAACATGGTCATCATCCAGGAATCCACCTCGGGGATCTGATCGCTGA | 2877 | 0.4348 | MATFAKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVEMRRGRFAKDGLIQYRITCQQVNVSSLEEVIKHFMHLATEKAEQARSQAQALEEALDVDDLEADKRPEDLMVSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLTAPDSLQLYLDTRFEQLKVATELQMWQEAFRSIEDIYGLMCLVKKTLKPSLMVLYYAKLTEIFWISRSYLYHAYAWFRLFLLQKSFNKNLTQKDLQLIASSVVLAALSVSPYDLSHGASNLELEHEKERNTKMANLMGFNLEAKPESREVVLCLSIVSKGVMSCAAQEVKDIYHLLEHEFVPLDLAAKVHPLLTKTSKFGGKISSAASVPDVQLSQYIPALEKLGTLRLLQQVSKIYLKMKIETLSGMIPFFDIADVEKITVDAVKHNFVQLKVDHARNCVVFCERSLESDGLFDQLANLAQEFSAARSMIYPPVKKASKSGDMLPNLHETLEKEHRKLLARKSVIEKRKEDQERQLLEMEREEETKRLRLRKITEEAEQKRLATEYEQRKNQRILREIQEKELEETQAVLEELKKKGKKPVIEGDKLTRETLRELALSEQLREKQEMEKKMQKLAKTMDYLERAKREESVPLIEAAYQQRLVEERKLHEHELQLETALSKQRHEGDLKEKERLARMKDNKEIFQERVVSQRQSELDRLREEREERISSILRSRKLEREKMRKYKYYLMLEEERQKKLREEEEARKHEEAERRRREEAERKAKLDEIAEKQRQRERELEEKERLRKEALLKSTTEAPARPTEPATAPAIAAAARPLESGSATAPAPGKYVPRYRRSETASQTPPETDRWGSSSGRQDDRMPPAADRWRSDDRRPAFGGSRSSSTWSSSRNPPRGSDR* | 959 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte13g00605 | 958 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 217 | 270 | - | - | |
| Pte13g00605 | 958 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 1 | 949 | IPR027512 | GO:0005852 | |
| Pte13g00605 | 958 | MobiDBLite | consensus disorder prediction | 896 | 911 | - | - | |
| Pte13g00605 | 958 | Coils | Coil | 550 | 598 | - | - | |
| Pte13g00605 | 958 | Gene3D | - | 349 | 489 | - | - | |
| Pte13g00605 | 958 | Gene3D | - | 269 | 343 | - | - | |
| Pte13g00605 | 958 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 1 | 928 | IPR027512 | GO:0005852 | |
| Pte13g00605 | 958 | Coils | Coil | 791 | 852 | - | - | |
| Pte13g00605 | 958 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 268 | 342 | - | - | |
| Pte13g00605 | 958 | MobiDBLite | consensus disorder prediction | 937 | 958 | - | - | |
| Pte13g00605 | 958 | MobiDBLite | consensus disorder prediction | 797 | 958 | - | - | |
| Pte13g00605 | 958 | Coils | Coil | 618 | 638 | - | - | |
| Pte13g00605 | 958 | ProSiteProfiles | PCI domain profile. | 293 | 509 | IPR000717 | - | |
| Pte13g00605 | 958 | Pfam | PCI domain | 375 | 504 | IPR000717 | - | |
| Pte13g00605 | 958 | Gene3D | UVR domain | 217 | 268 | - | - | |
| Pte13g00605 | 958 | MobiDBLite | consensus disorder prediction | 797 | 853 | - | - | |
| Pte13g00605 | 958 | Coils | Coil | 93 | 120 | - | - | |
| Pte13g00605 | 958 | MobiDBLite | consensus disorder prediction | 912 | 936 | - | - | |
| Pte13g00605 | 958 | Coils | Coil | 659 | 689 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte13g00605 | Pte-Chr13 | 4639524 | 4646020 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte13g00605 | 1 | 957 | Eukaryotic Initiation Factors Gene Family | AT4G11420 | 67.919 | 0.0 | 1256 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte13g00605 | K03254 | - | gmx:100782598 | 1275.77 |