Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00599 ATGCAGAGCCAAAGACAGAAACAGTTTAACAAACTGAAGCCATATATAGGGGTGATATTCTTGCAGACAGGATTTGCAGGGATGGATGTTCTGTCTAAGGCTGCATTGAACGAGGGGATGAGCAACTATGTACTAGTAGTCTACCGACATTTTGTGGCCTTCATCGTCATTGCTCCTTTTGCTGTGATACTAGACAAGAAAGTGAGACCAAAGATGACATTCTCCATCTTCATGAAGCTAGTGGCACTGAGTATTCTAGAGCCAGTTATAGACCAGAATTTGTATTTTATGGGAATGAAGTACACAACTGCAACTTTTGCTGCAGCAATGACTAACATCCTTCCTGCCATCACCTTTGTCATGGCCTGGATGCTAAGGATTGAGAAGATTAAAATGAGAAGCACACACAGCCAAGCAAAATTGATAGGGACGATAGCAACAGTAGGAGGAGCAATGGTCATGACATTAATAAAAGGACCAGCCTTTCAGTTGTTTCATACACAAGGAAGTACAGATCACCAACAGCATACTGGAGTAGTAAATCTTCAAAGTTCAATCAAAGGAGCAGCTATGATTACAGTCGGCTGTTTCTGTTGGGCTTGTTTCATGATTCTCCAAGCAATGACCCTGAAACAGTATCCTGCAGAGCTTTCCCTAACTGCATGGATATGCCTGTTGGGGACAATGGAGGGCACCCTAGTTGGACTTGTGATGGAAAGGGGTAACGCTAGTGTCTGGTCACTTGGTTGGGACACAAAATTAATTGCAGCTCTCTACAGCGGCATAGTTTGTTCTGGGCTTGCTTATTACGTTCAAGGCGTAGTGATGCAAGAAAGAGGTCCAGTTTTTGTCACAACCTTTAGTCCCCTGTGCATGGTAATCGTTGCTATCATGGGCTCTTTCATTCTGGCTGAGCAAATAAGCCTCGGAAGGGTAATTGGTGCTGTGATCATTGTTGCTGGCCTATACTTGGTGGTCTGGGGTAAAAGCATAGATTACAGTCCCCCAACTCCACCACTCGAAGATGATACGTTAAAAGCTAAACAAATAACAGATGCAAACAGCAGTAATGAAAACTTGAATCTGGAGATCGTTACTGTCAGTCCCTTGGGAGATAAGAACAGAACTCAAGTTTGTTTGGCATTTGAAGAAACCAAACAGAATACCAGTTAG 1173 0.4322 MQSQRQKQFNKLKPYIGVIFLQTGFAGMDVLSKAALNEGMSNYVLVVYRHFVAFIVIAPFAVILDKKVRPKMTFSIFMKLVALSILEPVIDQNLYFMGMKYTTATFAAAMTNILPAITFVMAWMLRIEKIKMRSTHSQAKLIGTIATVGGAMVMTLIKGPAFQLFHTQGSTDHQQHTGVVNLQSSIKGAAMITVGCFCWACFMILQAMTLKQYPAELSLTAWICLLGTMEGTLVGLVMERGNASVWSLGWDTKLIAALYSGIVCSGLAYYVQGVVMQERGPVFVTTFSPLCMVIVAIMGSFILAEQISLGRVIGAVIIVAGLYLVVWGKSIDYSPPTPPLEDDTLKAKQITDANSSNENLNLEIVTVSPLGDKNRTQVCLAFEETKQNTS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00599 390 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Pte13g00599 390 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020
Pte13g00599 390 PANTHER WAT1-RELATED PROTEIN 14 331 IPR030184 GO:0016020|GO:0022857
Pte13g00599 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 329 - -
Pte13g00599 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00599 Pte-Chr13 4584327 4586397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00599 2 378 Nodulin-like Gene Family AT2G37460 59.947 1.01e-171 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00599 - - qsa:O6P43_006766 538.11