Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00593 ATGGAGAGACTTCGCCATAAGAGGCCTAAGGTTGTCGACGTCACCGACATTCATTCGACTTCTGCGTTGGACGCTTTTCCTGCTCCACCTTCGCCTGTTCCTTCTAGAGACATCCCCAAGAATGCGAACTTTTCAAAATTTGGTTCTGATTCCAGCTCGTTCAGTAGTAAGACGGCAGACGAAGACAAGTTCTTACATCGTCTGGGCTGGAGATCTTCAAAACGGGCTTTTGAAACTTCTATCAAGAAGTTGATGTCTGACGAGATGTCAATAGAAACTAAGCTAAAAAGAAGACCAACCAGTGTCATTGCCAGATTGATGGGCCTTGATCGGCTGCCTCTTCAGCAGTCTTCTCGTAGATATCAACAAAAAATTTCGCCAGAGTGTCATTCAGAAAAAAAATCTTCAGTTGAGAATTACGGAAAACGGGGCGTACTGTATGGCCAGAGGTCATCTAGAAGAAGCTCTAAGGATGAACAACGATTTAAGGATGTGTTCGAGGTCTCTGAGACGCCAAATATGGGCAGGCACATGTACTTATCACAGATGAATGCAGATAATAAGGTCAACAATGCTGAAATGTCATTTATTGAACAGAAGTTTGTAGATGCCAGATGCCTCTTCACTGATAGAAGAGTCCCAAAATCACAGGATTTTGATGATACACTTGAGGTTGTAGACTCTAACCAAGATCTTTTGCTAAAATATTTTGAACAGCCAGACTCATTGCTCGCAAAGCATCTCAATGACTTGCAAGTCACCACTTTTCGATCTCATTGTGCTTACTCAGAATTTGTTCAGACATATGATGCTCACAAATACGAAAATGTTGACATGGAAAGGAAGTGTGGCAGAAGCAAAATGCGATTGAATTATAAAAAATCTCATCGCAAAGGTGACAATGGATTACCCAACAATCTTCATGGAATGCATGCTGTTTGCAGCTCAAAGTCCTCATATTTCCAATCAAGGGGAACAGACCAATCAACTGCAACCCCTACTACAATTGTGGTCCTCAAACCAAATCTTGGAAAGGTGAAGGATGCTGTTAAGATTGTTTCATCACCTTGCAACTCACATGATATCATTTTTGATCATTCAAACCACACAGACTTTTCTATTACCAGAACTGAGAAAGCTGGTACTCAAGAAAAGAAAAATTGTCAGAACATCCATATTTCAAAGAGGCGTTCCAAAGAACCAAGAGAAATAGCCAGCGAAGTCACTGAGAAAATGAAAAATAATATTAATGGTGGGTCCATGACCTCATCATCTTCTACATTTACTGCATATGTTGGAGCGTGCCATTTTCATGACAATGAATCTGCTGATGAATCAGAGTCGAGGAGAACAAAATCGAGCAACACTCCTTCATCCCTTGAATCTTATGATCGTAAGGAGGCCACAAAAAGACTGTCAGAGCGATGGAAATTGGCTCACAAGTCTAAAGAGGTAGAAATCAGTGGCCGAGGCAGCACACTGGCTGAAATGCTTGCTATCCCTGATAAGGAAACGTTGACACCAAAGTTTGACCGTTTAATTGGAGGAGAAAGAATCTATGATAAAATTTCTATTGATGACGTACCTTCAAGATGTGTTGAACTTGAACCATTGGGTATTAGTAGCAGAGATGGCTGGAAGGATGGATGCATACATAATCTGTCGTCATCAAAATCTCTTCCAGCTTCATCTGCCACACTTGGAAGACCTACTATGAGCTTATGTCGTAAACCATTTCCAGGTCACAATTATATGATATTAAATGATGCTTCAAAGGGAAAGAAGACCAGACCAAAGAAGGGCCATGATCCGAACTATGACTTGTGGAGACACTCAAAATCTGGCTGTAGAAAGTCTCGTTGTCATCACCCTACAACAGCAGCGACTTATGAATCATCACCCAACATGCATATAAATCAAAATAAAGTCATAAATAGTTTTGGCGGAAGTTGCCTGACCGATCAGGACCAGGATATTGTTACTGACAAACTGGCATTGAGTCTCAAAGCTAGTATCCCAGCTCCTGATAGTGTTGGAAACTTGGAACTTGGAAATGGTGGCGACCGTTTTGAACATGAAACAGATTTGTCTCCAGAAATATCCTTGTCTGTTACAGCTCAAGGTGAATCAGAAACTGCAGGAAAAAGCAACTTCGCCCAACAGGAACGATCAGTGAGGTCTTCTAATGAATACTCAATCTCTTCACAATCTACTGTACCTGGGCTTGAATCGCCGTCAAGCATCAAGGAAGTTGATCAACCAAGTCCAGTCTCAGTCTTGGAACCTTCTTTGACAGATGACTTGTCCTCGTGTTCCGACTGCTTCGAAAGTCTGAGTGCCAAACTTCGTGGATTGCGAATGCAATTACAGTTGCTCAAGTTTGAGTCAGAACCATATGTAGAAGGATCTGTTTTGATATCCAGTGATGAAGATGGTGAGGAGGGATCTGCTAGAAATTCAGATGAGAGTAGATCCTGTGGAATTGAAGATAGCTGGGAATCTTCCTATATTGTTGATATTCTGACTTATGCAAGGCTTGGTGATGATGTTGATCTTGATAATTCTATTGTAGAATGGCAGTCATCGGGTTACCCTGTTAATCCTTTGTTGTTCGACGAACTAGAGAAGAAATATTCCAATGTAACTTCTTGCATAAGGTCTGAGAGGAGGCTTCTATTTGACCGTGTGAACTTAGGACTCTATGACATCCCCCAGCAATTCATGGAGCTACGTCCATGGGCGAGGCCTGCAACAAAGCCTGCCTCTAATTTTATAACACATGTTGGCGATGGGGGTCTCCCTCCGATGCTGGCAAATAAGGGAACGAACGGAAACAAAGACACTTTGGGGACGGTGTTGGCTAGGGAGACAGAATGGTTGGACCTAAAAGATGAAATTCATGTTATAAGTCGGGAAATGGAGAAATTATTGATAAATGAGTTGATGACAGAGGTAATTTACACTTAA 2967 0.4173 MERLRHKRPKVVDVTDIHSTSALDAFPAPPSPVPSRDIPKNANFSKFGSDSSSFSSKTADEDKFLHRLGWRSSKRAFETSIKKLMSDEMSIETKLKRRPTSVIARLMGLDRLPLQQSSRRYQQKISPECHSEKKSSVENYGKRGVLYGQRSSRRSSKDEQRFKDVFEVSETPNMGRHMYLSQMNADNKVNNAEMSFIEQKFVDARCLFTDRRVPKSQDFDDTLEVVDSNQDLLLKYFEQPDSLLAKHLNDLQVTTFRSHCAYSEFVQTYDAHKYENVDMERKCGRSKMRLNYKKSHRKGDNGLPNNLHGMHAVCSSKSSYFQSRGTDQSTATPTTIVVLKPNLGKVKDAVKIVSSPCNSHDIIFDHSNHTDFSITRTEKAGTQEKKNCQNIHISKRRSKEPREIASEVTEKMKNNINGGSMTSSSSTFTAYVGACHFHDNESADESESRRTKSSNTPSSLESYDRKEATKRLSERWKLAHKSKEVEISGRGSTLAEMLAIPDKETLTPKFDRLIGGERIYDKISIDDVPSRCVELEPLGISSRDGWKDGCIHNLSSSKSLPASSATLGRPTMSLCRKPFPGHNYMILNDASKGKKTRPKKGHDPNYDLWRHSKSGCRKSRCHHPTTAATYESSPNMHINQNKVINSFGGSCLTDQDQDIVTDKLALSLKASIPAPDSVGNLELGNGGDRFEHETDLSPEISLSVTAQGESETAGKSNFAQQERSVRSSNEYSISSQSTVPGLESPSSIKEVDQPSPVSVLEPSLTDDLSSCSDCFESLSAKLRGLRMQLQLLKFESEPYVEGSVLISSDEDGEEGSARNSDESRSCGIEDSWESSYIVDILTYARLGDDVDLDNSIVEWQSSGYPVNPLLFDELEKKYSNVTSCIRSERRLLFDRVNLGLYDIPQQFMELRPWARPATKPASNFITHVGDGGLPPMLANKGTNGNKDTLGTVLARETEWLDLKDEIHVISREMEKLLINELMTEVIYT* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00593 988 MobiDBLite consensus disorder prediction 811 826 - -
Pte13g00593 988 PANTHER AFADIN 44 986 - -
Pte13g00593 988 MobiDBLite consensus disorder prediction 23 58 - -
Pte13g00593 988 MobiDBLite consensus disorder prediction 440 467 - -
Pte13g00593 988 MobiDBLite consensus disorder prediction 804 826 - -
Pte13g00593 988 Pfam Domain of unknown function (DUF4378) 834 919 IPR025486 -
Pte13g00593 988 Pfam DUF761-associated sequence motif 101 118 IPR032795 -
Pte13g00593 988 MobiDBLite consensus disorder prediction 705 766 - -
Pte13g00593 988 Pfam Protein of unknown function (DUF3741) 198 242 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00593 Pte-Chr13 4545481 4550136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00593 74 986 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 33.751 6.37e-116 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00593 - - qsa:O6P43_010379 701.434