Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00584 ATGTCTCGTGCAGCAGGAGCGCCACTAAAGTATACGCATAGAACACTGTCGTCGGCACAGCTGACACTGCCTCCCATTGCAGCCGATGACAGGTTCCCTTTCTTCAATCAATCCATGGAGCTCGTCCCACTTCCACATCATAAATCCAAAACTAGTCTATCCCCTACTCTTGGTGAGCTCTTAAAGTGGGTTGAAGATGCTCAAAGCAACAACGAGAAAAACGATCCTCAGCCTCAGCCTCATCATCGTGTTCTTGATCTTACCTACTCTACCAGTACTTCTGCACCTTCCACTTACCCCTTTGTCCTTGCTTTCAAGAATTTGACATACAGTGTAAAAGTTCACAGGAAGATCATCACTCTCCCTCCATGTTTCAACAGAACCAACAATGGTAATTACCATGGTATGGATGAGCGTGAAACTGAGACGACAAAAACCAATAATACCAAGGTCCTACTGAATGATATTTCTGGAGAAGCAGTAGAAGGTGAAGTCTTGGCGGTCCTTGGTGCTAGTGGATCTGGAAAATCTACACTCATAGATGCTGTAGCTGACCGTATTTCAAAGGATAGCTTAAAGGGTTCAGTGACTTTGAATGGGGAGGCATTGGAGTCTAGGCTTTTGAAGGTAATCTCAGCTTATGTCATGCAAGACGATCTTCTGTTTCCTATGCTCACAGTACAGGAGACACTCATGTTCTCTTCCGAGTTTAGGCTCCCACGGTCTCTTTCCAAGGCCAAGAAGAAGGCTAGAGTTCAAGCTCTCATCGATCAATTAGGTTTACGTAATGCAGCCAACACTGTCATTGGGGATGAAGGTCATCGTGGTGTTTCAGGCGGTGAGCGTCGTCGAGTATCAATCGGAATTGACATAATTCATGATCCCATTCTGCTATTTCTGGATGAACCCACTTCAGGACTGGACTCAACTAGTGCTTACATGGTGGTAAAGGTCTTGCAGAGGATCGCTCAGAGTGGGAGCATAGTCATTATGTCCATTCACCAACCCAGCTATAGAATTCTCAGCCTGTTAGACCGTTTGCTTTTCCTTTCAAATGGACAAACTGTGTACAGTGGCTCACCAAGTAAACTTCCACTGTTCTTCGCTGAGTTTGGACACCCCATACCAGAGAATGAGAACAAGACTGAGTTCGCTCTTGACCTAATACGCGAGCTAGAAGAGACTCCTGGTGGAACCAAAAAACTAGTAGAGTTCAACAAATCATGGCAAGAGAGAAACAATTCTGCAAACCGCAATTCCTTCACCGAAAGCAAAGTTTCACTTAAAGACGCCATTAGTGCTAGCATTTCCAGAGGTAAATTGGTATCTGGAGCAACTAATAGCACCAACCTAAGTACCATGCCTTTATCAGTGCCAACATTTGCTAATCCATTTTGGACAGAAATCATAGTGATAGCCAAACGTTCCCTAACAAACTCACGCAGGACGCCCGAATTGTTTGGTATCAGATTAGGTGCAGTCCTTGTCACTGGAGCCATCTTAGCCACAATCTTCTGGCATCTAGATAATTCTCCGAGAGGGGTTCAAGAACGAGTAGGCTTCTTCGCTTTTGCTATGTCCACTACCTTCTACACCTGCGCCGAAGCCATACCAGTTTTTCTTCAAGAACGATACATTTTCATGAGGGAAACAGCTTACAATGCTTATCGTCGCTTATCTTATGTCCTAGCTCATTCTATCATATCGATCCCCTCTTTGGTCCTTCTCTCTTTAGCATTTGCTGTGACAACATTTTGGGCAGTAGGCCTTGCCGGTGGACTATCTGGGTTCTTATTTTTCTTCTTAACCATTTTAGCTTCATTCTGGGCAGGAAGTTCGTTTGTGACCTTTCTTTCTGGGGTTGTCACCCATGTCATGTTGGGTTACACCGTGGTGGTTGGAATCTTAGCATACTTCCTTTTGTTCAGTGGGTTCTTCATCAGCAGAGACAGAATCCCTCCCTATTGGATTTGGTTTCACTTCTTGTCGCTGGTGAAGTATCCGTATGAGGCTGTGCTGCAAAACGAGTTTGATACGAAGCCAGTGCAATGTTTTGTGAGAGGGATTCAGATGTTTGACAATACTCCACTTGGCGAGGTCCCAATGAGTGTGAAGTTGGAATTGCTCAAAAGCATGAGCCGCACGTTGGGTATGAACATCACAAGTTCAACTTGTGTGACAACAGGTGTGGATATTCTGAAGCAGCAGGGGATCACAGACATAAGCAAATGGAATTGCCTGTGGGTTACTGTTGCTTGGGGTTTCTTCTTCAGACTTCTCTTCTACTTTACTTTGTTACTAGGAAGCAAGAATAAGAGAAGCTAA 2325 0.4469 MSRAAGAPLKYTHRTLSSAQLTLPPIAADDRFPFFNQSMELVPLPHHKSKTSLSPTLGELLKWVEDAQSNNEKNDPQPQPHHRVLDLTYSTSTSAPSTYPFVLAFKNLTYSVKVHRKIITLPPCFNRTNNGNYHGMDERETETTKTNNTKVLLNDISGEAVEGEVLAVLGASGSGKSTLIDAVADRISKDSLKGSVTLNGEALESRLLKVISAYVMQDDLLFPMLTVQETLMFSSEFRLPRSLSKAKKKARVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILSLLDRLLFLSNGQTVYSGSPSKLPLFFAEFGHPIPENENKTEFALDLIRELEETPGGTKKLVEFNKSWQERNNSANRNSFTESKVSLKDAISASISRGKLVSGATNSTNLSTMPLSVPTFANPFWTEIIVIAKRSLTNSRRTPELFGIRLGAVLVTGAILATIFWHLDNSPRGVQERVGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRLSYVLAHSIISIPSLVLLSLAFAVTTFWAVGLAGGLSGFLFFFLTILASFWAGSSFVTFLSGVVTHVMLGYTVVVGILAYFLLFSGFFISRDRIPPYWIWFHFLSLVKYPYEAVLQNEFDTKPVQCFVRGIQMFDNTPLGEVPMSVKLELLKSMSRTLGMNITSSTCVTTGVDILKQQGITDISKWNCLWVTVAWGFFFRLLFYFTLLLGSKNKRS* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00584 774 Pfam ABC transporter 153 305 IPR003439 GO:0005524
Pte13g00584 774 ProSitePatterns ABC transporters family signature. 277 291 IPR017871 GO:0005524|GO:0016887
Pte13g00584 774 SMART AAA_5 162 354 IPR003593 GO:0016887
Pte13g00584 774 FunFam ABC transporter G family member 6 141 368 - -
Pte13g00584 774 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 138 377 IPR003439 GO:0005524
Pte13g00584 774 Pfam ABC-2 type transporter 468 677 IPR013525 GO:0016020|GO:0140359
Pte13g00584 774 Gene3D - 141 366 IPR027417 -
Pte13g00584 774 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 760 - -
Pte13g00584 774 Pfam ABC-2 type transporter 334 428 IPR043926 GO:0140359
Pte13g00584 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 364 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00584 Pte-Chr13 4481387 4483711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00584 152 466 Calmodulin-binding Proteins AT2G36910 25.387 1.51e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00584 K05681 - qsa:O6P43_006742 1096.65