Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00577 ATGAGTGTGGATGATGATGACAAGGATTTGGGGGATCTGTGTCAACCTTTAAGAGATGGGCAGAGAACAAGTAAAGGCGATGGTGAGCAGGGAGCGCCTGAAGAAGATGATGTGAGGAGTAGTGGAAGGCTTGAAGATGTCACACATGGACAAGGAGGTACTGCTGAAGGCCAAGCTGTCTTGCAAATACCACAGCCCCAATCTCAAGGGGCAATGGTTTGTTGGGAGAGGTTTCTACATATTCGATCGCTAAAGGTTCTGCTCGTGGAATATGATGATTCCACACGTCACGTGGTCACTGCACTACTTCGCAATTGTAGTTATGAAGTTATTGAGGCAGCTACCGGTTTACAAGCATGGAAGATGTTAGAAGACTTGAGTAATCACATCGATCTTGTTCTAACTGAGGTAGCCATGCCCTGCTTATCGGGTATAGGTCTTCTATGCAAGATTATGAACCACAAGACCCGCAAAAATATTCCTGTCATTATGATGTCATCTCATGATTCAATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGGGCTGTTGACTTTTTAGTGAAGCCCATAAGGAAGAATGAGCTGAAGAACCTCTGGCAGCATGTTTGGAGGAGATGCCACAGTTCTAGTGGGAGTGGAAGTGAAAGCGGCACACAAACTCAGAAGTCAGTCAAATCAAAAGGTGTTGAGAAGTCTGATAACAATAGTGGTAGCAATGATGAAGAGGAGGACGAAAGTACTGGTCTAAATGTTGGAGATGGAAGCGATAATGGTAGTGGCACACAGAGCTCTTGGACAAAGCAAGCTGTTGAAGTCGACAGTCCTAGGCCAGTATCTGCATGGGATCACACAACTGAGTGCCCTGATAGCACCTGTGCTCAAGTTGTGCACTCCGTTGCTGAGATTTCTGGGAACAAGATGCTTCCTGTGGCAACAATGGAGTGTCAAGATCAGAAGGAACAACTAGAGCTGAAGGAGCTGAAGGCAGGTGTCAGTAAAGACCTTAACTTACTTGAATGCAGAAATGAGGTCCCACTAAAAGATGCCGGTGCAATACATAGTGGTCCACTTGAAATAGGCCCCAGTAGATTAAACGAGCTGACTAATAGAGAAAAACTGGATATTAATTGTGAGAATCTACCTTGCAATCTGAGGAGTAAAAACACCCTGATGGGTGGCTCAACTACGAAATCTGATCAGAAGGTGCACAGTGCAGAATTGGAGGCCCCAAATAGATTGTCCAAGGTGTCAAATGTTGATAATAAACCAAGTAATACTGAAGAGGGCCTGTCCCTGGAGCTAAGCTTAAAGAGACTCCGAGGTGTAAAAGATTGTGGGATTAATATACAAGAAGAACGCAATGTCTTGAGACGGTCAGACCTTTCAGCCTTTTCAAGGTACAATGCAGCTGCGAATAAGTCACCTGCAGACTATGTTGGAAGCAATTCCCCACACTGCGATTCATCTCGTGACATGCATTCTCATTCAAGTGGAAATAATCTCCTCAACCAAAACTCAAATGGGGCAAGCAATAACATTGATATGAATTCTATCACTAATAATGCTAATAGTAGGTCAGCTGTCATTAACAAGGCAGCAGTGGCATCAACAACCAAGTGTCCATACCCCACGTCAGCTTTCCAGGTTGTCAAGAACAATACTGTGAGTCCTAACCAGCAAGTGGTATTGCAATTTCATCATCACTACGATAGCCACTGCCACTTCCCTAGCAATACTCAGAAAACGGAGAACCCTGGCCATAATGAGGTTCCATTAAATAATACACCTGTTGCTCCCAACTGTGGGTTATCAAAGGCATTAGATGTAGTCGAAGGGAATGTGGGATACAGTGTCAATGGAAGTGCAACGGGAAGCAATAACGGGAGCAATGGACAAAATGGGAGCAGTACTGCAATTAACGCTGGAGGAACTAACATGGAAAGCAATAATCGAATTGCTGGAAACAGTGGAAGTGGTGATGCCAGTGGAAGTGGAACAAACAGAGTAGATCAAAACAAGACATCTCAGAGAGAAGCGGCATTAACCAAGTTTCGCCAGAAAAGAAAGGAGAGATGCTTCCATAAGAAGGTAACCATGAAAGTGGTTTTCGTTTATCACTTTTGGTGGTACATGGTTTCTAAAAACGTCTCTGATTTTCAAGTCTCTCATTACATGTTTACATTGCTTTTTAGCCCATCTAACTTGCTCTTGCCATGGAATCATTGA 2226 0.4385 MSVDDDDKDLGDLCQPLRDGQRTSKGDGEQGAPEEDDVRSSGRLEDVTHGQGGTAEGQAVLQIPQPQSQGAMVCWERFLHIRSLKVLLVEYDDSTRHVVTALLRNCSYEVIEAATGLQAWKMLEDLSNHIDLVLTEVAMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKGVEKSDNNSGSNDEEEDESTGLNVGDGSDNGSGTQSSWTKQAVEVDSPRPVSAWDHTTECPDSTCAQVVHSVAEISGNKMLPVATMECQDQKEQLELKELKAGVSKDLNLLECRNEVPLKDAGAIHSGPLEIGPSRLNELTNREKLDINCENLPCNLRSKNTLMGGSTTKSDQKVHSAELEAPNRLSKVSNVDNKPSNTEEGLSLELSLKRLRGVKDCGINIQEERNVLRRSDLSAFSRYNAAANKSPADYVGSNSPHCDSSRDMHSHSSGNNLLNQNSNGASNNIDMNSITNNANSRSAVINKAAVASTTKCPYPTSAFQVVKNNTVSPNQQVVLQFHHHYDSHCHFPSNTQKTENPGHNEVPLNNTPVAPNCGLSKALDVVEGNVGYSVNGSATGSNNGSNGQNGSSTAINAGGTNMESNNRIAGNSGSGDASGSGTNRVDQNKTSQREAALTKFRQKRKERCFHKKVTMKVVFVYHFWWYMVSKNVSDFQVSHYMFTLLFSPSNLLLPWNH* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00577 741 ProSiteProfiles Response regulatory domain profile. 85 203 IPR001789 GO:0000160
Pte13g00577 741 MobiDBLite consensus disorder prediction 621 677 - -
Pte13g00577 741 MobiDBLite consensus disorder prediction 1 15 - -
Pte13g00577 741 Gene3D - 83 340 - -
Pte13g00577 741 MobiDBLite consensus disorder prediction 22 44 - -
Pte13g00577 741 CDD psREC_PRR 86 189 - -
Pte13g00577 741 SMART REC_2 84 199 IPR001789 GO:0000160
Pte13g00577 741 MobiDBLite consensus disorder prediction 208 233 - -
Pte13g00577 741 MobiDBLite consensus disorder prediction 1 59 - -
Pte13g00577 741 MobiDBLite consensus disorder prediction 473 517 - -
Pte13g00577 741 PANTHER TWO-COMPONENT RESPONSE REGULATOR 84 315 IPR045279 GO:0009736
Pte13g00577 741 MobiDBLite consensus disorder prediction 208 278 - -
Pte13g00577 741 FunFam Two-component response regulator-like PRR37 84 242 - -
Pte13g00577 741 Pfam Response regulator receiver domain 86 197 IPR001789 GO:0000160
Pte13g00577 741 MobiDBLite consensus disorder prediction 250 270 - -
Pte13g00577 741 SUPERFAMILY CheY-like 82 208 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00577 Pte-Chr13 4398191 4405903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00577 160 697 Response Regulator Gene Family AT5G02810 44.834 5.40e-89 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte13g00577 Response_reg 1.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00577 K12129 - gmx:100796933 787.334