Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00566 ATGGAGGATAGGCTTCTCCTCCCATTGCTTTTCACACTCACACTGTCTTCTCGCTTGGGATTGTTTTCAGCTCAGATGCCAGTAGGTTTTGTAAGTTTGGATTGCGGAGGTAACGCAAGCTTTAGCGATGAACTCGGAATTTATTGGTCTCCGGATAATGTTACTTTCGGAGAATCAAGCACTATCTCCATTCCAAACGAAACACGAAAGCAGTACATGACTCTTCGACACTTTCCTGCTGATTCCAGGAAGTACTGTTACACTCTTAATGTGATGAGCAGGACAAGGTATCTGATACGAGCAACATTTCTGTATGGCAACTTCGACAACAATAATGTCTATCCAAAATTTGACATTTCGTTTGGACCAACTCACTGGTCCACGATTGTTATATCCGATGCCAGCACCATAGAAATGCAGGAGCTAATTTTTCTGGCCTCAACTTCTTCAGTCAGTGTGTGTTTGTCCAATGCAACGACTGGGGTTCCATTCATTTCTACTCTTGAACTTCGACAATTCAATGGTTCTGTATACTACACTGACTTTGAGGACCGGTATTACCTCAGTGTCTCTGCTCGGATAAATTTCGGTGCCGAATCTGAAGCTCCAATTAGGTATCCTGATGACCCGTTTGACAGAATTTGGGAGTCGGATTCTCTAAAGAAAGCAAATTACTTAGTTGATGTTGCTGCTGGAACTAAAAAAGTTTCAACCAATTTACCGATTGATGTTAACCGAGATGAAATGCCACCTGTTAAAGTCATGCAGACAGCAGTGACAGGCACACTGGGAACTCTAACTTATAGGTTAAACCTGGACGGTTTCCCTGGCAGTGGTTGGGCGTTCACCTACTTTGCTGAAATCGAGGATTTGCCTCCAGATGAATCTAGGAAGTTCAGGCTGGTACTTCCAGGGCAGCCTGATCTCAGCAAGGCTGTTGTCAATATTCAAGAAAATGCCCTAGGAAAATATCGTTTATATGAACCAGGGTATACCAACATCTCACTACCCTTTGTGTTGTCGTTCAAATTTGGGAAAACATCTGATTCTTCCAGGGGCCCTCTCGTGAATGCAATGGAGATAAATAAGTACCTGGAGAAAAATGATGGCTCTATTGATGGTAAATGGAAATGGCATTGTTCTTATGTCTTAAGTTACTTATATTTGTTAATACCAGTAACCTGTGTATCGTTCTGTAAACCAATGGCATTGCACTTTAAACTCTGGTCCTCTCTCCTTTTTTCTATAATAAGCTCATTAACTTCCAGTATGTATATAGGTGGAGTCATTTATAGTGCAGCCTCACACTTGTCTTCTGGAGAGTGGGCCCACGAAGGTGGAGATCCCTGCCTACCAGTTTCATGGTCGTGGGTGCGATGCAACTCAGATCCTCAACCCAGAATCGCTTCAATTTTGTTGTCGTCCAAGAATTTGACTGGCAATGTACCTTCAGACATCACCAAGTTGACTGGTTTGGTTGAATTGTGGCTTGATGGAAATATGTTGACCGGTCCAATACCTGATTTCTCTGGATGTGTAGGCTTGCAGATCATTCATCTTGAGAACAATCGATTAACGGGTGAGATCCCTTCGTCTCTGGCCAATCTCCCAAATTTGAGGGAATTATATCTACAGAACAACCAGTTATCTGGAAAAGTGCCTTCAGATCTCATTGGTGGAAAATTACTTTTGAACTATTCTGGAAATATTAATCTTCATAAAGGGAGCAGACAAGGAAGCCGTGTTCATATAATTATTTATTCATCAATTGGCGCGGGAGTACTTCTTTTAGCTACCATGCTGTTTTCCCTATGTATGTGCAAGGGGCAGAAACAGAATTATAAGGATGATCAATTTCTCTCTATCTCCACTCAAAAAACGGCTCCTTCCAAGAATGAAGCTCACACCGAAGTGGCACACTGCTTTAGTTATTCTGAAATTGAAAATGCTACAAACAAGTTTGAGAGAAAAATTGGCTCTGGAGGTTTTGGTGTTGTCTACTATGGGAAACTGAAAGATGGGAAAGAGATTGCAGTAAAAGTGTTAACCAGTAATTCCTACCAGGGGAAGCGGGAGTTCTCCAATGAGGTAACTCTCCTTTCGAGGATCCATCACAGAAACTTGGTGCAGTTTATTGGGTTCTGTCGAGATGAAGGAAACAGTATCCTCGTCTACGAGTTTATGCACAATGGAACTCTTAAGGAACACCTTTACGGTCCATTAACCCGTGGACGAAATATCAACTGGATTAAGCGCCTGGAGATCGCTGAAGATGCAGCGAAAGGGATTGAATATCTTCATACAGGCTGTGTACCTGCCATAATTCATAGAGACCTGAAAACCAGTAACATTCTTCTTGACAAACACATGCAAGCCAAAGTCTCAGATTTTGGTCTTTCAAAACTTGCTGTTGATGGAGCCTCTCATGTATCAAGCATAGTCCGGGGCACAGTAGGATATTTGGATCCTGAGTATTACATCTCCCAGCAGCTGACAGACAAAAGTGATGTATACAGTTTTGGCGTCATCCTTCTTGAATTAATCTCTGGCCAAGAAGCAATATCAAATGAAAGTTTTGGTGTTAATTGTCGAAACATCGTTCAGTGGGCCAAGTTACACATAGAGAGTGGCGACATTCAAGGTATCATTGATCCCTCTCTACACAACGAGTATGATATTCAATCTATGTGGAAGATAGCAGAGAAAGCATTGATGTGTGTCCAACCTCATGGACACATGCGGCCATCCATCTCAGAAATTCTCAAGGAAATCCAAGATGCAATATCCATAGAGAAGGAATCTGAGACATTAAGAGATGTCCATGCAAATAATATGTCAAGACATTCTATTCATTCAATGAATATCGGCTCCCTTGATTTGGGTGGAACCGACAATTATCTGTCAATAGACGAATCCATTGCACGGCCTACTGCACGATAG 2940 0.4204 MEDRLLLPLLFTLTLSSRLGLFSAQMPVGFVSLDCGGNASFSDELGIYWSPDNVTFGESSTISIPNETRKQYMTLRHFPADSRKYCYTLNVMSRTRYLIRATFLYGNFDNNNVYPKFDISFGPTHWSTIVISDASTIEMQELIFLASTSSVSVCLSNATTGVPFISTLELRQFNGSVYYTDFEDRYYLSVSARINFGAESEAPIRYPDDPFDRIWESDSLKKANYLVDVAAGTKKVSTNLPIDVNRDEMPPVKVMQTAVTGTLGTLTYRLNLDGFPGSGWAFTYFAEIEDLPPDESRKFRLVLPGQPDLSKAVVNIQENALGKYRLYEPGYTNISLPFVLSFKFGKTSDSSRGPLVNAMEINKYLEKNDGSIDGKWKWHCSYVLSYLYLLIPVTCVSFCKPMALHFKLWSSLLFSIISSLTSSMYIGGVIYSAASHLSSGEWAHEGGDPCLPVSWSWVRCNSDPQPRIASILLSSKNLTGNVPSDITKLTGLVELWLDGNMLTGPIPDFSGCVGLQIIHLENNRLTGEIPSSLANLPNLRELYLQNNQLSGKVPSDLIGGKLLLNYSGNINLHKGSRQGSRVHIIIYSSIGAGVLLLATMLFSLCMCKGQKQNYKDDQFLSISTQKTAPSKNEAHTEVAHCFSYSEIENATNKFERKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQFIGFCRDEGNSILVYEFMHNGTLKEHLYGPLTRGRNINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKTSNILLDKHMQAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPSLHNEYDIQSMWKIAEKALMCVQPHGHMRPSISEILKEIQDAISIEKESETLRDVHANNMSRHSIHSMNIGSLDLGGTDNYLSIDESIARPTAR* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00566 979 PANTHER OS07G0107800 PROTEIN-RELATED 515 928 - -
Pte13g00566 979 Gene3D Ribonuclease Inhibitor 428 577 IPR032675 -
Pte13g00566 979 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 728 937 - -
Pte13g00566 979 Gene3D Transferase(Phosphotransferase) domain 1 728 950 - -
Pte13g00566 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Pte13g00566 979 Pfam Protein kinase domain 654 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00566 979 Gene3D Phosphorylase Kinase; domain 1 624 727 - -
Pte13g00566 979 FunFam Leucine-rich repeat receptor-like protein kinase 630 727 - -
Pte13g00566 979 SUPERFAMILY L domain-like 453 561 - -
Pte13g00566 979 SMART serkin_6 652 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00566 979 Pfam Malectin-like domain 33 362 IPR024788 -
Pte13g00566 979 CDD STKc_IRAK 658 925 - -
Pte13g00566 979 FunFam Leucine-rich repeat protein kinase family protein 428 577 - -
Pte13g00566 979 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Pte13g00566 979 Pfam Leucine rich repeat 509 549 IPR001611 GO:0005515
Pte13g00566 979 SUPERFAMILY Protein kinase-like (PK-like) 633 922 IPR011009 -
Pte13g00566 979 ProSiteProfiles Protein kinase domain profile. 652 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00566 Pte-Chr13 4318911 4324932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00566 23 762 Receptor kinase-like Gene Family AT2G37050 64.439 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pte13g00566 Malectin_like 7.1e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00566 - - qsa:O6P43_006711 1500.34